RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ACCSLQ4AC99 568 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 RPUSD2Q8IZ73 545 aaKnown RBP13.42□□□□□ -0.26
CAPN1-208ENST00000527323 OLIG1Q8TAK6 271 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 POLR3CQ9BUI4 534 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-208ENST00000527323 GPR88Q9GZN0 384 aa13.42□□□□□ -0.26
CAPN1-208ENST00000527323 EIF3DO15371 548 aaKnown RBP eCLIP13.41□□□□□ -0.26
CAPN1-208ENST00000527323 GBP1P32455 592 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 AUHQ13825 339 aaKnown RBP13.41□□□□□ -0.26
CAPN1-208ENST00000527323 CNGA2Q16280 664 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 MAEAQ7L5Y9 396 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 MIEF2Q96C03 454 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 STAMBPL1Q96FJ0 436 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 THOC1Q96FV9 657 aaKnown RBP13.41□□□□□ -0.26
CAPN1-208ENST00000527323 CCDC17Q96LX7 622 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 TEPSINQ96N21 525 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 ZSWIM1Q9BR11 485 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 MKNK1Q9BUB5 465 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 PCIF1Q9H4Z3 704 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 ATP6V0A4Q9HBG4 840 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 AGPAT3Q9NRZ7 376 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.41□□□□□ -0.26
CAPN1-208ENST00000527323 L3MBTL1Q9Y468 752 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 TCP11X1B4DZS4 312 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 ATMINO43313 823 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-208ENST00000527323 KIF1CO43896 1103 aaKnown RBP13.41□□□□□ -0.26
CAPN1-208ENST00000527323 UBOX5O94941 541 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 PYGMP11217 842 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 RARGP13631 454 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 CETN1Q12798 172 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 FAM212AQ96EL1 285 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 WNK4Q96J92 1243 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 FGFR1OP2Q9NVK5 253 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 SLC12A4Q9UP95 1085 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 TCRBV7S2A1N4TA0A589 114 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 CFAP73A6NFT4 308 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 ANKRD63C9JTQ0 380 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 ENTPD3O75355 529 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 SREBF1P36956 1147 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 COILP38432 576 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-208ENST00000527323 MTMR2Q13614 643 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 NUGGCQ68CJ6 796 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 TATDN1Q6P1N9 297 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 ZNF720Q7Z2F6 126 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 DCAF4Q8WV16 495 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 ARHGEF2Q92974 986 aaKnown RBP13.41□□□□□ -0.26
CAPN1-208ENST00000527323 RUNDC3BQ96NL0 473 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 DNAJC17Q9NVM6 304 aaKnown RBP13.41□□□□□ -0.26
CAPN1-208ENST00000527323 PCYOX1Q9UHG3 505 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 VAV3Q9UKW4 847 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 AGAP1Q9UPQ3 857 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 STK38LQ9Y2H1 464 aa13.41□□□□□ -0.26
CAPN1-208ENST00000527323 PASKQ96RG2 1323 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 SNX1Q13596 522 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 MAP1SQ66K74 1059 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-208ENST00000527323 BTNL9Q6UXG8 535 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 C1orf186Q6ZWK4 172 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 EXOC3L1Q86VI1 746 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 ZDHHC14Q8IZN3 488 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 BTBD6Q96KE9 485 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 SYT11Q9BT88 431 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 ECT2Q9H8V3 914 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 USP15Q9Y4E8 981 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-208ENST00000527323 FER1L6Q2WGJ9 1857 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 SNX3O60493 162 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 SUN1O94901 812 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 KCNJ2P63252 427 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 BFSP1Q12934 665 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 KIF22Q14807 665 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 LRCH2Q5VUJ6 765 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 TMEM179Q6ZVK1 233 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 GDAP1Q8TB36 358 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 KLHL29Q96CT2 875 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 POP1Q99575 1024 aaKnown RBP13.4□□□□□ -0.26
CAPN1-208ENST00000527323 DDX23Q9BUQ8 820 aaKnown RBP13.4□□□□□ -0.26
CAPN1-208ENST00000527323 ASIC3Q9UHC3 531 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 ZHX2Q9Y6X8 837 aa13.4□□□□□ -0.26
CAPN1-208ENST00000527323 ZMYM2Q9UBW7 1377 aa13.4□□□□□ -0.27
CAPN1-208ENST00000527323 EMSYQ7Z589 1322 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 SLITRK3O94933 977 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 PPP2R5AQ15172 486 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 ZKSCAN8Q15776 578 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-208ENST00000527323 KIF2BQ8N4N8 673 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 NSMCE1Q8WV22 266 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 CRYGNQ8WXF5 182 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-208ENST00000527323 TMEM120BA0PK00 339 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 SORBS3O60504 671 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 ANP32DO95626 131 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 ECEL1O95672 775 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 RARAP10276 462 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 NQO1P15559 274 aaKnown RBP13.39□□□□□ -0.27
CAPN1-208ENST00000527323 CTNNA2P26232 953 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 CAP2P40123 477 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 GCLMP48507 274 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 FKBP1AP62942 108 aaKnown RBP13.39□□□□□ -0.27
CAPN1-208ENST00000527323 C11orf63Q6NUN7 778 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 SLC13A5Q86YT5 568 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-208ENST00000527323 CLMNQ96JQ2 1002 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 WNT8AQ9H1J5 351 aa13.39□□□□□ -0.27
CAPN1-208ENST00000527323 PKD2L1Q9P0L9 805 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms