RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 MSANTD4Q8NCY6 345 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 NLRP4Q96MN2 994 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 C16orf70Q9BSU1 422 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 HAPLN2Q9GZV7 340 aa17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 TOPORSQ9NS56 1045 aaPredicted RBP17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 RBAKQ9NYW8 714 aaPredicted RBP17.52■□□□□ 0.39
SNRNP35-204ENST00000527158 H3BRB1 525 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 ENC1O14682 589 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 LRRN2O75325 713 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 MOCS3O95396 460 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 KLRC1P26715 233 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 CLCN3P51790 818 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 TNFAIP2Q03169 654 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 DGKDQ16760 1214 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 PPM1KQ8N3J5 372 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 SEMA4DQ92854 862 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 NT5C1BQ96P26 610 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 TUT1Q9H6E5 874 aaKnown RBP17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 ZFYVE28Q9HCC9 887 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 RAB21Q9UL25 225 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 JRKLQ9Y4A0 524 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 COL1A2P08123 1366 aa17.51■□□□□ 0.39
SNRNP35-204ENST00000527158 EDN1P05305 212 aa17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 TMOD1P28289 359 aa17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 IRF5Q13568 498 aa17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 C17orf99Q6UX52 265 aa17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 CRELD2Q6UXH1 353 aaPredicted RBP17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 TAS1R2Q8TE23 839 aa17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 CCDC102AQ96A19 550 aa17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 ACO2Q99798 780 aaKnown RBP17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 SAR1BQ9Y6B6 198 aa17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 ATP1A1P05023 1023 aaKnown RBP17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 MMP3P08254 477 aa17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 HOXC6P09630 235 aa17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 SREBF2Q12772 1141 aa17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 KIF22Q14807 665 aa17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 PAPD7Q5XG87 772 aaKnown RBP17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 SIP14410 1827 aa17.5■□□□□ 0.39
SNRNP35-204ENST00000527158 INO80B-WBP1J3KQ70 363 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 ZC3H11AO75152 810 aaKnown RBP eCLIP17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 HARSP12081 509 aaKnown RBP17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 AMPD2Q01433 879 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 SMC1AQ14683 1233 aaKnown RBP17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 FAM81BQ96LP2 452 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 INO80BQ9C086 356 aaPredicted RBP17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 PDE11AQ9HCR9 933 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 CAPN6Q9Y6Q1 641 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 ZNF236Q9UL36 1845 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 PASKQ96RG2 1323 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 DDX3XO00571 662 aaKnown RBP eCLIP17.49■□□□□ 0.391e-6■■■□□ 16.8
SNRNP35-204ENST00000527158 ACKR2O00590 384 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 GJB1P08034 283 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 HOXD8P13378 290 aaPredicted RBP17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 TNFAIP3P21580 790 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 USP8P40818 1118 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 PTENP60484 403 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 POU5F1BQ06416 359 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 C15orf39Q6ZRI6 1047 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 TRAPPC11Q7Z392 1133 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 ZBTB33Q86T24 672 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 U2AF1L4Q8WU68 220 aaKnown RBP17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 ZNF516Q92618 1163 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 ZBTB10Q96DT7 871 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 PACSIN1Q9BY11 444 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 FUT8Q9BYC5 575 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 NFKBIZQ9BYH8 718 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 FZD8Q9H461 694 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 SALL4Q9UJQ4 1053 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 TLL2Q9Y6L7 1015 aa17.49■□□□□ 0.39
SNRNP35-204ENST00000527158 ATP8B3O60423 1300 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 CTAGE15A4D2H0 777 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 BTNL10A8MVZ5 291 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 BUB1O43683 1085 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 CTAGE8P0CG41 777 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 MCM3P25205 808 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 PHKA2P46019 1235 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 PRPF4BQ13523 1007 aaKnown RBP17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 LONRF2Q1L5Z9 754 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 TMEM132AQ24JP5 1023 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 WDR44Q5JSH3 913 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 TSHZ1Q6ZSZ6 1077 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 HDXQ7Z353 690 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 CTAGE6Q86UF2 777 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 GLYCTKQ8IVS8 523 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 CTAGE4Q8IX94 777 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 SLC30A5Q8TAD4 765 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 INTUQ9ULD6 942 aa17.48■□□□□ 0.39
SNRNP35-204ENST00000527158 TTLL13PA6NNM8 815 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 MAP2K7O14733 419 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 DYNC1LI2O43237 492 aaPredicted RBP17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 SEC31AO94979 1220 aaKnown RBP17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 H2AFZP0C0S5 128 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 RGS2P41220 211 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 MCL1Q07820 350 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 PPFIA1Q13136 1202 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 BIRC3Q13489 604 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 ZACNQ401N2 412 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 ZBTB41Q5SVQ8 909 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 PRAMEF19Q5SWL8 479 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms