RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 SPAG1Q07617 926 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 LAMTOR4Q0VGL1 99 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 SLC24A5Q71RS6 500 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 HS2ST1Q7LGA3 356 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 RHPN2Q8IUC4 686 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 FAM114A1Q8IWE2 563 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 ZBTB8OSQ8IWT0 167 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 TMEM161BQ8NDZ6 487 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 ANKRD20A12PQ8NF67 263 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 GOLGA5Q8TBA6 731 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 ZNF668Q96K58 619 aaPredicted RBP13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 MAP7D2Q96T17 732 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 DUSP9Q99956 384 aaKnown RBP13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 SRRTQ9BXP5 876 aaKnown RBP13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 GBP3Q9H0R5 595 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 C2orf40Q9H1Z8 148 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 KCTD10Q9H3F6 313 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 THAP9Q9H5L6 903 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 C1orf112Q9NSG2 853 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 TYW1Q9NV66 732 aaKnown RBP13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 CGNQ9P2M7 1197 aaKnown RBP13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 MAGEC2Q9UBF1 373 aaPredicted RBP13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 TRAF3IP3Q9Y228 551 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 AKT3Q9Y243 479 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 MRPL42Q9Y6G3 142 aaKnown RBP13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 PHLPP2Q6ZVD8 1323 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 K7ERI5 159 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 SRGAP2CP0DJJ0 459 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 DARSP14868 501 aaKnown RBP13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 RPL13P26373 211 aaKnown RBP13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 CTNNB1P35222 781 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 HOXD13P35453 343 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 EFNA5P52803 228 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 SNRPFP62306 86 aaKnown RBP13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 CDC42EP1Q00587 391 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 STRN3Q13033 797 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 CAPSQ13938 189 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 CAMK1Q14012 370 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 PTPROQ16827 1216 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 AAK1Q2M2I8 961 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 EDRF1Q3B7T1 1238 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 ADAMTS19Q8TE59 1207 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 KCNN1Q92952 543 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 SAMSN1Q9NSI8 373 aaKnown RBP13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 ARHGAP28Q9P2N2 729 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 TBX20Q9UMR3 447 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 RWDD3Q9Y3V2 267 aa13.86□□□□□ -0.19
SSSCA1-203ENST00000526877 CETN3O15182 167 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 SERPINC1P01008 464 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 ZNF18P17022 549 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 POU5F1BQ06416 359 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 KCNA1Q09470 495 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 COL19A1Q14993 1142 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 ZCWPW2Q504Y3 356 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 CDKAL1Q5VV42 579 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 SARM1Q6SZW1 724 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 MAP4K3Q8IVH8 894 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 KSR1Q8IVT5 923 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 RNF149Q8NC42 400 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 CEP63Q96MT8 703 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 C11orf84Q9BUA3 381 aaPredicted RBP13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 KIFC3Q9BVG8 833 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 PLVAPQ9BX97 442 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 TRIM5Q9C035 493 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 TMEM134Q9H6X4 195 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 ELAC1Q9H777 363 aaKnown RBP13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 LRFN2Q9ULH4 789 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 PLAGL2Q9UPG8 496 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 PCDHB7Q9Y5E2 793 aa13.85□□□□□ -0.19
SSSCA1-203ENST00000526877 MUC3AQ02505 3323 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 TNFRSF10AO00220 468 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 CBFA2T2O43439 604 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 GNA14O95837 355 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 FGFR4P22455 802 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 DNAJB1P25685 340 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 EEF1GP26641 437 aaKnown RBP13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 PHKA2P46019 1235 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 FANCCQ00597 558 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 ADAM9Q13443 819 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 NFIL3Q16649 462 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 PAN2Q504Q3 1202 aaKnown RBP13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 HSP90AA4PQ58FG1 418 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 TCEAL5Q5H9L2 206 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 FILIP1Q7Z7B0 1213 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 CREBRFQ8IUR6 639 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 SPPL3Q8TCT6 385 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 NLRP4Q96MN2 994 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 NECAB3Q96P71 396 aaPredicted RBP13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 UHRF1Q96T88 793 aaPredicted RBP13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 LMAN2LQ9H0V9 348 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 HSD3B7Q9H2F3 369 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 UBE2ZQ9H832 354 aaPredicted RBP13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 ALG13Q9NP73 1137 aaKnown RBP13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 RNF19AQ9NV58 838 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 TMEM161AQ9NX61 479 aa13.84□□□□□ -0.19
SSSCA1-203ENST00000526877 ZMYM2Q9UBW7 1377 aa13.83□□□□□ -0.19
SSSCA1-203ENST00000526877 PLXNA4Q9HCM2 1894 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 A0A087WZ62 844 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 KCNJ18B7U540 433 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 CLIC2O15247 247 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms