RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 BLOC1S4Q9NUP1 217 aa22.64■■□□□ 1.21
VPS28-206ENST00000526734 KLK14Q9P0G3 267 aa22.64■■□□□ 1.21
VPS28-206ENST00000526734 HCFC2Q9Y5Z7 792 aa22.64■■□□□ 1.21
VPS28-206ENST00000526734 BRD1O95696 1058 aa22.63■■□□□ 1.21
VPS28-206ENST00000526734 EFEMP2O95967 443 aa22.63■■□□□ 1.21
VPS28-206ENST00000526734 MCF2P10911 925 aa22.63■■□□□ 1.21
VPS28-206ENST00000526734 GRM5P41594 1212 aa22.63■■□□□ 1.21
VPS28-206ENST00000526734 YARSP54577 528 aaKnown RBP22.63■■□□□ 1.21
VPS28-206ENST00000526734 RAD51AP2Q09MP3 1159 aa22.63■■□□□ 1.21
VPS28-206ENST00000526734 SLC39A14Q15043 492 aa22.63■■□□□ 1.21
VPS28-206ENST00000526734 ARSHQ5FYA8 562 aa22.63■■□□□ 1.21
VPS28-206ENST00000526734 ZPBP2Q6X784 338 aa22.63■■□□□ 1.21
VPS28-206ENST00000526734 TAS1R3Q7RTX0 852 aa22.63■■□□□ 1.21
VPS28-206ENST00000526734 TMEM161BQ8NDZ6 487 aa22.63■■□□□ 1.21
VPS28-206ENST00000526734 CDT1Q9H211 546 aa22.63■■□□□ 1.21
VPS28-206ENST00000526734 PTPRHQ9HD43 1115 aa22.63■■□□□ 1.21
VPS28-206ENST00000526734 USP15Q9Y4E8 981 aaPredicted RBP22.63■■□□□ 1.21
VPS28-206ENST00000526734 C19orf67A6NJJ6 358 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 SFI1A8K8P3 1242 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 PTGESO14684 152 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 MAPTP10636 758 aaKnown RBP22.62■■□□□ 1.21
VPS28-206ENST00000526734 PROZP22891 400 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 MARCKSP29966 332 aaPredicted RBP22.62■■□□□ 1.21
VPS28-206ENST00000526734 NASPP49321 788 aaPredicted RBP22.62■■□□□ 1.21
VPS28-206ENST00000526734 GLUD2P49448 558 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 ZNF131P52739 623 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 NCKAP1LP55160 1127 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 MPZL3Q6UWV2 235 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 KRI1Q8N9T8 703 aaKnown RBP22.62■■□□□ 1.21
VPS28-206ENST00000526734 ZNF396Q96N95 335 aaPredicted RBP22.62■■□□□ 1.21
VPS28-206ENST00000526734 USP28Q96RU2 1077 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 REEP2Q9BRK0 252 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 TARS2Q9BW92 718 aaKnown RBP22.62■■□□□ 1.21
VPS28-206ENST00000526734 C1QTNF1Q9BXJ1 281 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 PARVGQ9HBI0 331 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 ADAM28Q9UKQ2 775 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 USP20Q9Y2K6 914 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 BDP1A6H8Y1 2624 aa22.62■■□□□ 1.21
VPS28-206ENST00000526734 TBCAO75347 108 aaKnown RBP22.61■■□□□ 1.21
VPS28-206ENST00000526734 TOM1L1O75674 476 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 FAM13AO94988 1023 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 C1RP00736 705 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 KRT18P05783 430 aaKnown RBP22.61■■□□□ 1.21
VPS28-206ENST00000526734 DDIT3P35638 169 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 CREMQ03060 361 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 ITIH3Q06033 890 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 MCM6Q14566 821 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 HSP90AA2PQ14568 343 aaPredicted RBP22.61■■□□□ 1.21
VPS28-206ENST00000526734 LLGL2Q6P1M3 1020 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 FAM173BQ6P4H8 233 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 ELMSAN1Q6PJG2 1045 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 AUTS2Q8WXX7 1259 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 SUSD6Q92537 303 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 TCHPQ9BT92 498 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.61■■□□□ 1.21
VPS28-206ENST00000526734 GDAQ9Y2T3 454 aa22.61■■□□□ 1.21
VPS28-206ENST00000526734 SF3B1O75533 1304 aaKnown RBP eCLIP22.6■■□□□ 1.21
VPS28-206ENST00000526734 LILRB3O75022 631 aa22.6■■□□□ 1.21
VPS28-206ENST00000526734 RBM10P98175 930 aaKnown RBP22.6■■□□□ 1.21
VPS28-206ENST00000526734 DSG1Q02413 1049 aa22.6■■□□□ 1.21
VPS28-206ENST00000526734 ELAVL2Q12926 359 aaKnown RBP22.6■■□□□ 1.21
VPS28-206ENST00000526734 KIAA1841Q6NSI8 718 aa22.6■■□□□ 1.21
VPS28-206ENST00000526734 FUT10Q6P4F1 479 aa22.6■■□□□ 1.21
VPS28-206ENST00000526734 SYCE2Q6PIF2 218 aa22.6■■□□□ 1.21
VPS28-206ENST00000526734 EPSTI1Q96J88 318 aa22.6■■□□□ 1.21
VPS28-206ENST00000526734 UROC1Q96N76 676 aa22.6■■□□□ 1.21
VPS28-206ENST00000526734 PHF7Q9BWX1 381 aaPredicted RBP22.6■■□□□ 1.21
VPS28-206ENST00000526734 S1PR5Q9H228 398 aa22.6■■□□□ 1.21
VPS28-206ENST00000526734 DPP7Q9UHL4 492 aa22.6■■□□□ 1.21
VPS28-206ENST00000526734 TDRD15B5MCY1 1934 aaKnown RBP22.6■■□□□ 1.21
VPS28-206ENST00000526734 ADH1AP07327 375 aa22.59■■□□□ 1.21
VPS28-206ENST00000526734 CEBPZQ03701 1054 aaKnown RBP22.59■■□□□ 1.21
VPS28-206ENST00000526734 DHX8Q14562 1220 aaKnown RBP22.59■■□□□ 1.21
VPS28-206ENST00000526734 STK38Q15208 465 aa22.59■■□□□ 1.21
VPS28-206ENST00000526734 USP41Q3LFD5 358 aa22.59■■□□□ 1.21
VPS28-206ENST00000526734 CES5AQ6NT32 575 aa22.59■■□□□ 1.21
VPS28-206ENST00000526734 CCDC73Q6ZRK6 1079 aa22.59■■□□□ 1.21
VPS28-206ENST00000526734 HAUS6Q7Z4H7 955 aa22.59■■□□□ 1.21
VPS28-206ENST00000526734 SLC22A17Q8WUG5 538 aa22.59■■□□□ 1.21
VPS28-206ENST00000526734 NECTIN4Q96NY8 510 aa22.59■■□□□ 1.21
VPS28-206ENST00000526734 KLHL5Q96PQ7 755 aa22.59■■□□□ 1.21
VPS28-206ENST00000526734 RXFP1Q9HBX9 757 aa22.59■■□□□ 1.21
VPS28-206ENST00000526734 CD320Q9NPF0 282 aa22.59■■□□□ 1.21
VPS28-206ENST00000526734 CHST7Q9NS84 486 aa22.59■■□□□ 1.21
VPS28-206ENST00000526734 SLC38A7Q9NVC3 462 aa22.59■■□□□ 1.21
VPS28-206ENST00000526734 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.59■■□□□ 1.21
VPS28-206ENST00000526734 NPHP3-ACAD11A0A0J9YXS1 232 aa22.58■■□□□ 1.21
VPS28-206ENST00000526734 TMEM189-UBE2V1I3L0A0 370 aa22.58■■□□□ 1.21
VPS28-206ENST00000526734 ABLIM1O14639 778 aa22.58■■□□□ 1.21
VPS28-206ENST00000526734 TADA2AO75478 443 aa22.58■■□□□ 1.21
VPS28-206ENST00000526734 YEATS4O95619 227 aa22.58■■□□□ 1.21
VPS28-206ENST00000526734 CNPP09543 421 aaKnown RBP22.58■■□□□ 1.21
VPS28-206ENST00000526734 ALADP13716 330 aa22.58■■□□□ 1.21
VPS28-206ENST00000526734 KLRC2P26717 231 aa22.58■■□□□ 1.21
VPS28-206ENST00000526734 CACNB1Q02641 598 aaPredicted RBP22.58■■□□□ 1.21
VPS28-206ENST00000526734 CBX2Q14781 532 aaPredicted RBP22.58■■□□□ 1.21
VPS28-206ENST00000526734 NOLC1Q14978 699 aaKnown RBP eCLIP22.58■■□□□ 1.21
VPS28-206ENST00000526734 NAB2Q15742 525 aa22.58■■□□□ 1.21
VPS28-206ENST00000526734 KYAT1Q16773 422 aa22.58■■□□□ 1.21
VPS28-206ENST00000526734 XKR4Q5GH76 650 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms