RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 AKAP5P24588 427 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 MCM4P33991 863 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 DSG1Q02413 1049 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 ANGPT1Q15389 498 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 HS1BP3Q53T59 392 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 SLC27A1Q6PCB7 646 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 CDR2LQ86X02 465 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-204ENST00000526468 PALB2Q86YC2 1186 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 HSCBQ8IWL3 235 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 RSAD2Q8WXG1 361 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 RIN2Q8WYP3 895 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-204ENST00000526468 RTP3Q9BQQ7 232 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 COLEC11Q9BWP8 271 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 ADAM28Q9UKQ2 775 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 TPCN1Q9ULQ1 816 aa13.01□□□□□ -0.33
CAPN1-204ENST00000526468 NUP210Q8TEM1 1887 aaPredicted RBP13□□□□□ -0.33
CAPN1-204ENST00000526468 TSC2P49815 1807 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 COL4A2P08572 1712 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 SF3B1O75533 1304 aaKnown RBP eCLIP13□□□□□ -0.334e-6■■■■■ 34.5
CAPN1-204ENST00000526468 PI15O43692 258 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 RPL17P18621 184 aaKnown RBP13□□□□□ -0.33
CAPN1-204ENST00000526468 GLRA2P23416 452 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 CREMQ03060 361 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 AMHR2Q16671 573 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 TMEM132AQ24JP5 1023 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 USP41Q3LFD5 358 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 KIAA0319Q5VV43 1072 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 IFNLR1Q8IU57 520 aaPredicted RBP13□□□□□ -0.33
CAPN1-204ENST00000526468 DTWD2Q8NBA8 298 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 HASPINQ8TF76 798 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 RABGGTAQ92696 567 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 ZNF707Q96C28 371 aaPredicted RBP13□□□□□ -0.33
CAPN1-204ENST00000526468 MYADMQ96S97 322 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 TBC1D17Q9HA65 648 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 RXFP1Q9HBX9 757 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13□□□□□ -0.33
CAPN1-204ENST00000526468 MIOSQ9NXC5 875 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 KLK14Q9P0G3 267 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 EPS15L1Q9UBC2 864 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 CACNG4Q9UBN1 327 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 PARP2Q9UGN5 583 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 GIT1Q9Y2X7 761 aa13□□□□□ -0.33
CAPN1-204ENST00000526468 GPR179Q6PRD1 2367 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 POTEMA6NI47 508 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 TGM5O43548 720 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 CTDNEP1O95476 244 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 SRFP11831 508 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 RARRES1P49788 294 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 CYP26C1Q6V0L0 522 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 TNFRSF25Q93038 417 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 RHOBTB2Q9BYZ6 727 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 GPR62Q9BZJ7 368 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 TTC12Q9H892 705 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-204ENST00000526468 ARHGEF3Q9NR81 526 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 ANKEF1Q9NU02 776 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 ZDHHC7Q9NXF8 308 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 PCDHA12Q9UN75 941 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 DMXL1Q9Y485 3027 aa12.99□□□□□ -0.33
CAPN1-204ENST00000526468 DENND4CQ5VZ89 1909 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 KRBA1A5PL33 1030 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 CASTOR2A6NHX0 329 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 SLITRK3O94933 977 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 KIF4AO95239 1232 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 LYPLA2O95372 231 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 EFEMP2O95967 443 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 ARL2P36404 184 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 TXKP42681 527 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 CCDC173Q0VFZ6 552 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 ANKRD1Q15327 319 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 SPECC1Q5M775 1068 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 LIN9Q5TKA1 542 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 PRSS55Q6UWB4 352 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-204ENST00000526468 MAEAQ7L5Y9 396 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 ZBTB8OSQ8IWT0 167 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 ADSSL1Q8N142 457 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 GPR152Q8TDT2 470 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 PIGOQ8TEQ8 1089 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 HDAC7Q8WUI4 952 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 SNX21Q969T3 373 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 NAP1L5Q96NT1 182 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-204ENST00000526468 NFKBIZQ9BYH8 718 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 PLEKHA4Q9H4M7 779 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 GPRC5CQ9NQ84 441 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 FBXW11Q9UKB1 542 aa12.98□□□□□ -0.33
CAPN1-204ENST00000526468 WNT7AO00755 349 aa12.97□□□□□ -0.33
CAPN1-204ENST00000526468 TADA2AO75478 443 aa12.97□□□□□ -0.33
CAPN1-204ENST00000526468 LARGE1O95461 756 aa12.97□□□□□ -0.33
CAPN1-204ENST00000526468 LIG1P18858 919 aa12.97□□□□□ -0.33
CAPN1-204ENST00000526468 POU5F1BQ06416 359 aa12.97□□□□□ -0.33
CAPN1-204ENST00000526468 TUSC3Q13454 348 aa12.97□□□□□ -0.33
CAPN1-204ENST00000526468 HTR4Q13639 388 aa12.97□□□□□ -0.33
CAPN1-204ENST00000526468 TRIM29Q14134 588 aa12.97□□□□□ -0.33
CAPN1-204ENST00000526468 PSMD5Q16401 504 aa12.97□□□□□ -0.33
CAPN1-204ENST00000526468 RTP2Q5QGT7 225 aa12.97□□□□□ -0.33
CAPN1-204ENST00000526468 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-204ENST00000526468 DIS3L2Q8IYB7 885 aaKnown RBP12.97□□□□□ -0.33
CAPN1-204ENST00000526468 NECAB1Q8N987 351 aa12.97□□□□□ -0.33
CAPN1-204ENST00000526468 GSTCDQ8NEC7 633 aa12.97□□□□□ -0.33
CAPN1-204ENST00000526468 MCPH1Q8NEM0 835 aa12.97□□□□□ -0.33
CAPN1-204ENST00000526468 ST13P5Q8NFI4 369 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms