RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CHMP2AO43633 222 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 BAG4O95429 457 aaKnown RBP12.14□□□□□ -0.47
NEDD8-204ENST00000526430 RETP07949 1114 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 ZSCAN20P17040 1043 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-204ENST00000526430 KLRC2P26717 231 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 CDC25AP30304 524 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 RPS9P46781 194 aaKnown RBP12.14□□□□□ -0.47
NEDD8-204ENST00000526430 STAT5BP51692 787 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 NUCB2P80303 420 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 EPHA7Q15375 998 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 KIZQ2M2Z5 673 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 AXDND1Q5T1B0 1012 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-204ENST00000526430 ARL6IP4Q66PJ3 421 aaKnown RBP12.14□□□□□ -0.47
NEDD8-204ENST00000526430 ELMSAN1Q6PJG2 1045 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 USP49Q70CQ1 688 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 SMAP1Q8IYB5 467 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-204ENST00000526430 HELQQ8TDG4 1101 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 CLDN23Q96B33 292 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 CLIC6Q96NY7 704 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 KLHL5Q96PQ7 755 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 RAB23Q9ULC3 237 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 CIZ1Q9ULV3 898 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-204ENST00000526430 ZFP37Q9Y6Q3 630 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-204ENST00000526430 A0A087WWV3 80 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 CCDC195A0A1B0GUA6 201 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 WDR64B1ANS9 1081 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 ZBTB42B2RXF5 422 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 HBP1O60381 514 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 LILRB3O75022 631 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 ZC3H11AO75152 810 aaKnown RBP eCLIP12.13□□□□□ -0.47
NEDD8-204ENST00000526430 GPR32O75388 356 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 MED24O75448 989 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 CNPP09543 421 aaKnown RBP12.13□□□□□ -0.47
NEDD8-204ENST00000526430 MARCKSP29966 332 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-204ENST00000526430 SFNP31947 248 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 MLF2Q15773 248 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-204ENST00000526430 CSRP2Q16527 193 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 N4BP2L1Q5TBK1 243 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-204ENST00000526430 PRR23CQ6ZRP0 262 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 MIER3Q7Z3K6 550 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 CATSPER3Q86XQ3 398 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 CELF5Q8N6W0 485 aaKnown RBP12.13□□□□□ -0.47
NEDD8-204ENST00000526430 KDF1Q8NAX2 398 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-204ENST00000526430 RDM1Q8NG50 284 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 BCL7CQ8WUZ0 217 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-204ENST00000526430 EIF2AK1Q9BQI3 630 aaKnown RBP12.13□□□□□ -0.47
NEDD8-204ENST00000526430 VN1R3Q9BXE9 311 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 LTB4R2Q9NPC1 389 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 MAN1C1Q9NR34 630 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 SEMA4GQ9NTN9 838 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 GABBR1Q9UBS5 961 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 ZMIZ1Q9ULJ6 1067 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 SRPRBQ9Y5M8 271 aaKnown RBP12.13□□□□□ -0.47
NEDD8-204ENST00000526430 NUMBLQ9Y6R0 609 aa12.13□□□□□ -0.47
NEDD8-204ENST00000526430 PDCD11Q14690 1871 aaKnown RBP12.12□□□□□ -0.47
NEDD8-204ENST00000526430 DMXL2Q8TDJ6 3036 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 ITPR1Q14643 2758 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 NOTCH4Q99466 2003 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 TMEM150BA6NC51 233 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 INPPL1O15357 1258 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 JAK3P52333 1124 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 LIMK1P53667 647 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 NRLP54845 237 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 CTTNQ14247 550 aaKnown RBP12.12□□□□□ -0.47
NEDD8-204ENST00000526430 UBXN2BQ14CS0 331 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 TARBP2Q15633 366 aaKnown RBP12.12□□□□□ -0.47
NEDD8-204ENST00000526430 ATL3Q6DD88 541 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 NCAPH2Q6IBW4 605 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 MIS18BP1Q6P0N0 1132 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 ZNF710Q8N1W2 664 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
NEDD8-204ENST00000526430 HDAC7Q8WUI4 952 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 BBXQ8WY36 941 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-204ENST00000526430 DYDC2Q96IM9 177 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 PNMA5Q96PV4 448 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 ZNF302Q9NR11 478 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 CHMP5Q9NZZ3 219 aa12.12□□□□□ -0.47
NEDD8-204ENST00000526430 MTF2Q9Y483 593 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-204ENST00000526430 HELZ2Q9BYK8 2649 aaKnown RBP12.11□□□□□ -0.47
NEDD8-204ENST00000526430 VWA3AA6NCI4 1184 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 FAM170BA6NMN3 283 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 PPP6R2O75170 966 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 LYPLA2O95372 231 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 YEATS4O95619 227 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 C1RP00736 705 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 PSAPP07602 524 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 GALTP07902 379 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 TDGF1P13385 188 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 GPC5P78333 572 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 SNW1Q13573 536 aaKnown RBP12.11□□□□□ -0.47
NEDD8-204ENST00000526430 ZNF484Q5JVG2 852 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 ZBTB41Q5SVQ8 909 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 UNQ6494/PRO21346Q6UXR6 183 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 DTHD1Q6ZMT9 781 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 MAMSTRQ6ZN01 415 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 ANO5Q75V66 913 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 RNF169Q8NCN4 708 aa12.11□□□□□ -0.47
NEDD8-204ENST00000526430 SMG7Q92540 1137 aaKnown RBP12.11□□□□□ -0.47
NEDD8-204ENST00000526430 ZNF707Q96C28 371 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-204ENST00000526430 EPSTI1Q96J88 318 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms