RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ROM1Q03395 351 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 USP10Q14694 798 aaKnown RBP5.59□□□□□ -1.51
USP48-211ENST00000526044 KRT24Q2M2I5 525 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 TTC38Q5R3I4 469 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 EGFLAMQ63HQ2 1017 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 DDX46Q7L014 1031 aaKnown RBP5.59□□□□□ -1.51
USP48-211ENST00000526044 OTOP2Q7RTS6 562 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 RALYLQ86SE5 291 aaKnown RBP5.59□□□□□ -1.51
USP48-211ENST00000526044 THNSL2Q86YJ6 484 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 TSPYL6Q8N831 410 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 MAML3Q96JK9 1138 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 GPR101Q96P66 508 aaPredicted RBP5.59□□□□□ -1.51
USP48-211ENST00000526044 KRTAP9-8Q9BYQ0 159 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 ZDHHC5Q9C0B5 715 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 H2AFY2Q9P0M6 372 aaPredicted RBP5.59□□□□□ -1.51
USP48-211ENST00000526044 KDM3BQ7LBC6 1761 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 TOGARAM1Q9Y4F4 1720 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 MRC1P22897 1456 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 HEG1Q9ULI3 1381 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 BTAF1O14981 1849 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 A0A0G2JNJ9 132 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 MAFO75444 373 aaPredicted RBP5.58□□□□□ -1.52
USP48-211ENST00000526044 STARD3NLO95772 234 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 PRLP01236 227 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 HOXB7P09629 217 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 CSF2RBP32927 897 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 ETV4P43268 484 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 LSSP48449 732 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 IL2P60568 153 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 PPP2CBP62714 309 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 PPP2CAP67775 309 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 MOGSQ13724 837 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 EIF4HQ15056 248 aaKnown RBP5.58□□□□□ -1.52
USP48-211ENST00000526044 DHCR24Q15392 516 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 ALDH1L2Q3SY69 923 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 CCDC30Q5VVM6 783 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 GRAMD4Q6IC98 578 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 SLFN12LQ6IEE8 588 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 TIGD7Q6NT04 549 aaPredicted RBP5.58□□□□□ -1.52
USP48-211ENST00000526044 C11orf74Q86VG3 221 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 TUBGCP5Q96RT8 1024 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 TMX1Q9H3N1 280 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 CAAP1Q9H8G2 361 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 Q9UFV3 132 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 RCAN3Q9UKA8 241 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 CDC42EP3Q9UKI2 254 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 USP16Q9Y5T5 823 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 NHSQ6T4R5 1651 aa5.58□□□□□ -1.52
USP48-211ENST00000526044 PALLDQ8WX93 1383 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 ZNF536O15090 1300 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 TCERG1O14776 1098 aaKnown RBP5.57□□□□□ -1.52
USP48-211ENST00000526044 FKBP9O95302 570 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 PLATP00750 562 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 CYP19A1P11511 503 aaPredicted RBP5.57□□□□□ -1.52
USP48-211ENST00000526044 CD40P25942 277 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 SOX5P35711 763 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 STAT3P40763 770 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 ADCYAP1R1P41586 468 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 RGS3P49796 1198 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 KCNQ1P51787 676 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 RARSP54136 660 aaKnown RBP5.57□□□□□ -1.52
USP48-211ENST00000526044 SMAD3P84022 425 aaKnown RBP5.57□□□□□ -1.52
USP48-211ENST00000526044 MAP3K12Q12852 859 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 LRRC32Q14392 662 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 TBC1D10BQ4KMP7 808 aaPredicted RBP5.57□□□□□ -1.52
USP48-211ENST00000526044 TMEM200BQ69YZ2 307 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 ESRP1Q6NXG1 681 aaKnown RBP5.57□□□□□ -1.52
USP48-211ENST00000526044 ARHGEF18Q6ZSZ5 1173 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 FKBP9P1Q75LS8 142 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 RNF180Q86T96 592 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 CERS3Q8IU89 383 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 PHYKPLQ8IUZ5 450 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 DNAJC10Q8IXB1 793 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 CHAC2Q8WUX2 184 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 USP7Q93009 1102 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 STK31Q9BXU1 1019 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 SPTLC3Q9NUV7 552 aa5.57□□□□□ -1.52
USP48-211ENST00000526044 DBF4Q9UBU7 674 aaPredicted RBP5.57□□□□□ -1.52
USP48-211ENST00000526044 CCNL1Q9UK58 526 aaPredicted RBP5.57□□□□□ -1.52
USP48-211ENST00000526044 CNOT11Q9UKZ1 510 aaKnown RBP5.57□□□□□ -1.52
USP48-211ENST00000526044 CACNA1FO60840 1977 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 IPO8O15397 1037 aaKnown RBP5.56□□□□□ -1.52
USP48-211ENST00000526044 LAMTOR5O43504 91 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 TGM5O43548 720 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 BCAR3O75815 825 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 HMGCRP04035 888 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 A1BGP04217 495 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 ZNF888P0CJ79 500 aaPredicted RBP5.56□□□□□ -1.52
USP48-211ENST00000526044 CANXP27824 592 aaKnown RBP5.56□□□□□ -1.52
USP48-211ENST00000526044 ITPK1Q13572 414 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 TXNRD1Q16881 649 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 ZNF827Q17R98 1081 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 ZMAT1Q5H9K5 638 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 GPR158Q5T848 1215 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 PRAMEF9Q5VWM5 478 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 TRIM68Q6AZZ1 485 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 GPR155Q7Z3F1 870 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 UBR7Q8N806 425 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 C7orf31Q8N865 590 aa5.56□□□□□ -1.52
USP48-211ENST00000526044 SSH1Q8WYL5 1049 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms