RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 KIF21BO75037 1637 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 IQGAP2Q13576 1575 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 TRIM75PA6NK02 468 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 IL33O95760 270 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 RECQLP46063 649 aaPredicted RBP5.05□□□□□ -1.6
CD44-219ENST00000525685 SLC16A1P53985 500 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 EPHB1P54762 984 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 CRHR2Q13324 411 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 TUBA3CQ13748 450 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 FHL2Q14192 279 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 ELAVL1Q15717 326 aaKnown RBP5.05□□□□□ -1.6
CD44-219ENST00000525685 MBNL2Q5VZF2 373 aaKnown RBP5.05□□□□□ -1.6
CD44-219ENST00000525685 TUBA3EQ6PEY2 450 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 ORAI2Q96SN7 254 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 EPC1Q9H2F5 836 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 PRDM12Q9H4Q4 367 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 RCAN3Q9UKA8 241 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 TMPRSS11EQ9UL52 423 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 KIAA0586Q9BVV6 1533 aa5.05□□□□□ -1.6
CD44-219ENST00000525685 SUV39H1O43463 412 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 AKR1B10O60218 316 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 LY86O95711 162 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 GAAP10253 952 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 GSPT1P15170 499 aaKnown RBP5.04□□□□□ -1.6
CD44-219ENST00000525685 AGXTP21549 392 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 MCM7P33993 719 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 PER3P56645 1201 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 KIF23Q02241 960 aaPredicted RBP5.04□□□□□ -1.6
CD44-219ENST00000525685 NOMO1Q15155 1222 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 INAVAQ3KP66 663 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 UAP1L1Q3KQV9 507 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 FKBP15Q5T1M5 1219 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 BTNL9Q6UXG8 535 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 KCNK18Q7Z418 384 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 CMTM4Q8IZR5 234 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 MIER2Q8N344 545 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 AMER2Q8N7J2 671 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 SSH1Q8WYL5 1049 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 JADE3Q92613 823 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 UHRF1Q96T88 793 aaPredicted RBP5.04□□□□□ -1.6
CD44-219ENST00000525685 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.04□□□□□ -1.6
CD44-219ENST00000525685 PARPBPQ9NWS1 579 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 ZNF180Q9UJW8 692 aa5.04□□□□□ -1.6
CD44-219ENST00000525685 E2F8A0AVK6 867 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 NDUFS2O75306 463 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 ALDH1A2O94788 518 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 LTA4HP09960 611 aaKnown RBP5.03□□□□□ -1.6
CD44-219ENST00000525685 ADSLP30566 484 aaPredicted RBP5.03□□□□□ -1.6
CD44-219ENST00000525685 MTNR1BP49286 362 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 MAN2A2P49641 1150 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 RAB27AP51159 221 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 RABGGTBP53611 331 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 UBE3CQ15386 1083 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 ANO4Q32M45 955 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 MFSD5Q6N075 450 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 LYSMD2Q8IV50 215 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 UNC5BQ8IZJ1 945 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 GLB1L3Q8NCI6 653 aaPredicted RBP5.03□□□□□ -1.6
CD44-219ENST00000525685 PIK3C3Q8NEB9 887 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 TSPEARQ8WU66 669 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 RIN2Q8WYP3 895 aaPredicted RBP5.03□□□□□ -1.6
CD44-219ENST00000525685 ARL8AQ96BM9 186 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 TEKT5Q96M29 485 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 ZNF512Q96ME7 567 aaPredicted RBP5.03□□□□□ -1.6
CD44-219ENST00000525685 SLC13A1Q9BZW2 595 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 GREM2Q9H772 168 aa5.03□□□□□ -1.6
CD44-219ENST00000525685 RPTORQ8N122 1335 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 KIAA0556O60303 1618 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 PCDHGA12O60330 932 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 PHF2O75151 1096 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 STC2O76061 302 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 SEC24DO94855 1032 aaPredicted RBP5.02□□□□□ -1.61
CD44-219ENST00000525685 PEX11BO96011 259 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 ZSCAN20P17040 1043 aaPredicted RBP5.02□□□□□ -1.61
CD44-219ENST00000525685 NPEPPSP55786 919 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 SLC25A3Q00325 362 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 MEF2AQ02078 507 aaPredicted RBP5.02□□□□□ -1.61
CD44-219ENST00000525685 DUSP2Q05923 314 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 MALLQ13021 153 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 CNGB1Q14028 1251 aaPredicted RBP5.02□□□□□ -1.61
CD44-219ENST00000525685 TOB2Q14106 344 aaPredicted RBP5.02□□□□□ -1.61
CD44-219ENST00000525685 PPP2R5AQ15172 486 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 ADRM1Q16186 407 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 C1QL3Q5VWW1 255 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 HTR3DQ70Z44 454 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 GSPT2Q8IYD1 628 aaKnown RBP5.02□□□□□ -1.61
CD44-219ENST00000525685 ELOA2Q8IYF1 753 aaPredicted RBP5.02□□□□□ -1.61
CD44-219ENST00000525685 GPR156Q8NFN8 814 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 OR5M3Q8NGP4 307 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 ZNF483Q8TF39 744 aaPredicted RBP5.02□□□□□ -1.61
CD44-219ENST00000525685 FDXACB1Q9BRP7 624 aaPredicted RBP5.02□□□□□ -1.61
CD44-219ENST00000525685 GPR87Q9BY21 358 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 ENKD1Q9H0I2 346 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 SLITRK6Q9H5Y7 841 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 MMRN2Q9H8L6 949 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 ING3Q9NXR8 418 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 ZIM2Q9NZV7 527 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 KLHL42Q9P2K6 505 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 INTUQ9ULD6 942 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 ANKRD6Q9Y2G4 727 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms