RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 THP07101 528 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 MAPTP10636 758 aaKnown RBP19.22■□□□□ 0.67
NR1H3-228ENST00000525441 MCF2P10911 925 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 YARSP54577 528 aaKnown RBP19.22■□□□□ 0.67
NR1H3-228ENST00000525441 TUSC3Q13454 348 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 MPZL3Q6UWV2 235 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 CCDC73Q6ZRK6 1079 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 USP49Q70CQ1 688 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 FAM178BQ8IXR5 827 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 MYCT1Q8N699 235 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 LINC00301Q8NCQ3 95 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 LRRC15Q8TF66 581 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 CASP10Q92851 521 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 VN1R3Q9BXE9 311 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 CDT1Q9H211 546 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 PTPRHQ9HD43 1115 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 TOPORSQ9NS56 1045 aaPredicted RBP19.22■□□□□ 0.67
NR1H3-228ENST00000525441 MARCH5Q9NX47 278 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 PRKAG3Q9UGI9 489 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 XIRP2A4UGR9 3374 aa19.22■□□□□ 0.67
NR1H3-228ENST00000525441 SPTLC2O15270 562 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 CLASP2O75122 1294 aaKnown RBP19.21■□□□□ 0.67
NR1H3-228ENST00000525441 SOD2P04179 222 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 URODP06132 367 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 ABCD1P33897 745 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 GRM5P41594 1212 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 ZNF131P52739 623 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 NCKAP1LP55160 1127 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 PTPN14Q15678 1187 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 SMAD2Q15796 467 aaKnown RBP19.21■□□□□ 0.67
NR1H3-228ENST00000525441 FOXD4L5Q5VV16 416 aaPredicted RBP19.21■□□□□ 0.67
NR1H3-228ENST00000525441 LLGL2Q6P1M3 1020 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 ZPBP2Q6X784 338 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 SPRYD3Q8NCJ5 442 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 SMRP1Q8NCR6 262 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 VN1R2Q8NFZ6 395 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 FOXD4L4Q8WXT5 416 aaPredicted RBP19.21■□□□□ 0.67
NR1H3-228ENST00000525441 AUTS2Q8WXX7 1259 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 HERC2P3Q9BVR0 1158 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 EMILIN2Q9BXX0 1053 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 ZHX3Q9H4I2 956 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 MRPL17Q9NRX2 175 aaKnown RBP19.21■□□□□ 0.67
NR1H3-228ENST00000525441 TDRD15B5MCY1 1934 aaKnown RBP19.21■□□□□ 0.67
NR1H3-228ENST00000525441 MYH11P35749 1972 aa19.21■□□□□ 0.67
NR1H3-228ENST00000525441 SPTBN5Q9NRC6 3674 aaKnown RBP19.2■□□□□ 0.66
NR1H3-228ENST00000525441 PTGESO14684 152 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 PPP6R2O75170 966 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 TOM1L1O75674 476 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 YEATS4O95619 227 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 BRD1O95696 1058 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 F13A1P00488 732 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 HOXB8P17481 243 aaPredicted RBP19.2■□□□□ 0.66
NR1H3-228ENST00000525441 PROZP22891 400 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 KCNC3Q14003 757 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 ANKRD54Q6NXT1 300 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 SV2BQ7L1I2 683 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 HAUS6Q7Z4H7 955 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 ZBTB33Q86T24 672 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 PPFIBP1Q86W92 1011 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 KCNN1Q92952 543 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 BICD1Q96G01 975 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 TFIP11Q9UBB9 837 aaKnown RBP19.2■□□□□ 0.66
NR1H3-228ENST00000525441 HCFC2Q9Y5Z7 792 aa19.2■□□□□ 0.66
NR1H3-228ENST00000525441 BDP1A6H8Y1 2624 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 K7ENM7 598 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 TRAK2O60296 914 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 TADA2AO75478 443 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 SSTR3P32745 418 aaPredicted RBP19.19■□□□□ 0.66
NR1H3-228ENST00000525441 STAT6P42226 847 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 GLUD2P49448 558 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 RBM10P98175 930 aaKnown RBP19.19■□□□□ 0.66
NR1H3-228ENST00000525441 HSP90AA2PQ14568 343 aaPredicted RBP19.19■□□□□ 0.66
NR1H3-228ENST00000525441 NOLC1Q14978 699 aaKnown RBP eCLIP19.19■□□□□ 0.66
NR1H3-228ENST00000525441 TPRNQ4KMQ1 711 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 ATL3Q6DD88 541 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 KIAA1841Q6NSI8 718 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 ADHFE1Q8IWW8 467 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 GJD3Q8N144 294 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 ACAP3Q96P50 834 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 POP1Q99575 1024 aaKnown RBP19.19■□□□□ 0.66
NR1H3-228ENST00000525441 ANKFY1Q9P2R3 1169 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 ADAM28Q9UKQ2 775 aa19.19■□□□□ 0.66
NR1H3-228ENST00000525441 CASTOR2A6NHX0 329 aa19.18■□□□□ 0.66
NR1H3-228ENST00000525441 CLDN3O15551 220 aa19.18■□□□□ 0.66
NR1H3-228ENST00000525441 HARSP12081 509 aaKnown RBP19.18■□□□□ 0.66
NR1H3-228ENST00000525441 MATR3P43243 847 aaKnown RBP eCLIP19.18■□□□□ 0.66
NR1H3-228ENST00000525441 OSTNP61366 133 aa19.18■□□□□ 0.66
NR1H3-228ENST00000525441 FUT10Q6P4F1 479 aa19.18■□□□□ 0.66
NR1H3-228ENST00000525441 RNF168Q8IYW5 571 aaPredicted RBP19.18■□□□□ 0.66
NR1H3-228ENST00000525441 DZANK1Q9NVP4 752 aa19.18■□□□□ 0.66
NR1H3-228ENST00000525441 USP15Q9Y4E8 981 aaPredicted RBP19.18■□□□□ 0.66
NR1H3-228ENST00000525441 ABLIM1O14639 778 aa19.17■□□□□ 0.66
NR1H3-228ENST00000525441 EFEMP2O95967 443 aa19.17■□□□□ 0.66
NR1H3-228ENST00000525441 KLRC2P26717 231 aa19.17■□□□□ 0.66
NR1H3-228ENST00000525441 LIG4P49917 911 aa19.17■□□□□ 0.66
NR1H3-228ENST00000525441 ZP2Q05996 745 aa19.17■□□□□ 0.66
NR1H3-228ENST00000525441 USP41Q3LFD5 358 aa19.17■□□□□ 0.66
NR1H3-228ENST00000525441 GPR65Q8IYL9 337 aa19.17■□□□□ 0.66
NR1H3-228ENST00000525441 CEP120Q8N960 986 aa19.17■□□□□ 0.66
NR1H3-228ENST00000525441 KCNG4Q8TDN1 519 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms