RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 RBM8AQ9Y5S9 174 aaKnown RBP5.93□□□□□ -1.46
USP47-206ENST00000525367 ABHD14A-ACY1A0A1B0GW23 586 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 TCAF2A6NFQ2 919 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 F5H423 210 aaPredicted RBP5.92□□□□□ -1.46
USP47-206ENST00000525367 SLC26A4O43511 780 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 NBNO60934 754 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 UBXN7O94888 489 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 FSBPO95073 299 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 TARDBPQ13148 414 aaKnown RBP eCLIP5.92□□□□□ -1.46
USP47-206ENST00000525367 LONRF1Q17RB8 773 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 MST1LQ2TV78 715 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 L1TD1Q5T7N2 865 aaKnown RBP5.92□□□□□ -1.46
USP47-206ENST00000525367 MIGA2Q7L4E1 593 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 DENND1CQ8IV53 801 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 UNC5BQ8IZJ1 945 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 FAM43AQ8N2R8 423 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 TP53I13Q8NBR0 393 aaPredicted RBP5.92□□□□□ -1.46
USP47-206ENST00000525367 TXNDC5Q8NBS9 432 aaKnown RBP5.92□□□□□ -1.46
USP47-206ENST00000525367 REPS2Q8NFH8 660 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 SNX33Q8WV41 574 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 HDAC10Q969S8 669 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 DACT3Q96B18 629 aaPredicted RBP5.92□□□□□ -1.46
USP47-206ENST00000525367 FAM193BQ96PV7 902 aaPredicted RBP5.92□□□□□ -1.46
USP47-206ENST00000525367 UIMC1Q96RL1 719 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 CGRRF1Q99675 332 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 PDCD2LQ9BRP1 358 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 PAGR1Q9BTK6 254 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 B3GNT5Q9BYG0 378 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 KATNBL1Q9H079 304 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 AS3MTQ9HBK9 375 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 NTMQ9P121 344 aa5.92□□□□□ -1.46
USP47-206ENST00000525367 MORC2Q9Y6X9 1032 aaPredicted RBP5.92□□□□□ -1.46
USP47-206ENST00000525367 SH3D21A4FU49 640 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 TPP1O14773 563 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 B3GALT2O43825 422 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 DTNBO60941 627 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 TUSC2O75896 110 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 ALDH1A2O94788 518 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 ZBED1O96006 694 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 CYP1A1P04798 512 aaPredicted RBP5.91□□□□□ -1.46
USP47-206ENST00000525367 SYN1P17600 705 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 TYRP1P17643 537 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 SARSP49591 514 aaKnown RBP5.91□□□□□ -1.46
USP47-206ENST00000525367 MAP2K6P52564 334 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 LINC00310P59036 64 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 SWSAP1Q6NVH7 229 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 XRRA1Q6P2D8 792 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 CARFQ8N187 725 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 ZGPATQ8N5A5 531 aaKnown RBP5.91□□□□□ -1.46
USP47-206ENST00000525367 FAM156AQ8NDB6 213 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 OR14K1Q8NGZ2 314 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.91□□□□□ -1.46
USP47-206ENST00000525367 ADAMTS17Q8TE56 1095 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 MBD6Q96DN6 1003 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 C1GALT1C1Q96EU7 318 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 AJUBAQ96IF1 538 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 FAM84AQ96KN4 292 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 NT5C1BQ96P26 610 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 DMRTA2Q96SC8 542 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 CDC5LQ99459 802 aaKnown RBP5.91□□□□□ -1.46
USP47-206ENST00000525367 TMEM168Q9H0V1 697 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 ZDHHC9Q9Y397 364 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 CTDP1Q9Y5B0 961 aaPredicted RBP5.91□□□□□ -1.46
USP47-206ENST00000525367 RPTORQ8N122 1335 aa5.91□□□□□ -1.46
USP47-206ENST00000525367 H3BML4 177 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 PIP5K1CO60331 668 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 ZKSCAN1P17029 563 aaPredicted RBP5.9□□□□□ -1.46
USP47-206ENST00000525367 HTR1BP28222 390 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 CASP2P42575 452 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 CCT5P48643 541 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 MEOX1P50221 254 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 ATP2C1P98194 919 aaPredicted RBP5.9□□□□□ -1.46
USP47-206ENST00000525367 PDCD2Q16342 344 aaPredicted RBP5.9□□□□□ -1.46
USP47-206ENST00000525367 ZNF827Q17R98 1081 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 AGBL4Q5VU57 503 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 TAS1R1Q7RTX1 841 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 PLA2G15Q8NCC3 412 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 PLBD2Q8NHP8 589 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 CCHCR1Q8TD31 782 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 TRIM63Q969Q1 353 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 C7orf25Q9BPX7 421 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 CARD11Q9BXL7 1154 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 TRPS1Q9UHF7 1281 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 PCDHGB6Q9Y5F9 930 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 NR2E3Q9Y5X4 410 aa5.9□□□□□ -1.46
USP47-206ENST00000525367 NPIPB6E9PJ23 425 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 TOX4O94842 621 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 FTLP02792 175 aaPredicted RBP5.89□□□□□ -1.47
USP47-206ENST00000525367 AMY1AP04745 511 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 FPR1P21462 350 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 ECHS1P30084 290 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 SREBF1P36956 1147 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 AFF3P51826 1226 aaKnown RBP5.89□□□□□ -1.47
USP47-206ENST00000525367 ADAM8P78325 824 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 MEF2AQ02078 507 aaPredicted RBP5.89□□□□□ -1.47
USP47-206ENST00000525367 BTKQ06187 659 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 USP10Q14694 798 aaKnown RBP5.89□□□□□ -1.47
USP47-206ENST00000525367 MAN2A1Q16706 1144 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 NPNTQ6UXI9 565 aa5.89□□□□□ -1.47
USP47-206ENST00000525367 CCDC149Q6ZUS6 474 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms