RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 HNRNPLP14866 589 aaKnown RBP eCLIP6.18□□□□□ -1.42
USP47-204ENST00000525078 NPR1P16066 1061 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 CTSSP25774 331 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 STAT5AP42229 794 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 MAN2A2P49641 1150 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 PLIN5Q00G26 463 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 SLC6A3Q01959 620 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 LRP8Q14114 963 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 GAS6Q14393 721 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 MYBPC3Q14896 1274 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 KHDC1LQ5JSQ8 128 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 SLFN12LQ6IEE8 588 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 BTNL9Q6UXG8 535 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.18□□□□□ -1.42
USP47-204ENST00000525078 FBXO11Q86XK2 927 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 CILP2Q8IUL8 1156 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 LYSMD2Q8IV50 215 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 ADGRG2Q8IZP9 1017 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 TSPYL6Q8N831 410 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 TDRD7Q8NHU6 1098 aaKnown RBP6.18□□□□□ -1.42
USP47-204ENST00000525078 GIMAP7Q8NHV1 300 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 SPPL3Q8TCT6 385 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 FBLIM1Q8WUP2 373 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 AFG1LQ8WV93 481 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 RFFLQ8WZ73 363 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 HERVK_113Q902F9 699 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 GOLGA1Q92805 767 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 VMP1Q96GC9 406 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 DUSP23Q9BVJ7 150 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 TDP1Q9NUW8 608 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 STK32BQ9NY57 414 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 CFDP1Q9UEE9 299 aaPredicted RBP6.18□□□□□ -1.42
USP47-204ENST00000525078 FEZ2Q9UHY8 353 aaPredicted RBP6.18□□□□□ -1.42
USP47-204ENST00000525078 X6R8D5 127 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 MYPNQ86TC9 1320 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 SMTNL1A8MU46 457 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 FAM171A2A8MVW0 826 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 PRR33A8MZF0 331 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 SHISA8B8ZZ34 492 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 USO1O60763 962 aaKnown RBP6.17□□□□□ -1.42
USP47-204ENST00000525078 DKC1O60832 514 aaKnown RBP eCLIP6.17□□□□□ -1.42
USP47-204ENST00000525078 LEFTY1O75610 366 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 APOA4P06727 396 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 NID1P14543 1247 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 ALOX12P18054 663 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 CASP6P55212 293 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 RNASE9P60153 205 aaKnown RBP6.17□□□□□ -1.42
USP47-204ENST00000525078 ARF3P61204 181 aaPredicted RBP6.17□□□□□ -1.42
USP47-204ENST00000525078 RPS16P62249 146 aaKnown RBP6.17□□□□□ -1.42
USP47-204ENST00000525078 RAC1P63000 192 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 ARF1P84077 181 aaKnown RBP6.17□□□□□ -1.42
USP47-204ENST00000525078 UBE3AQ05086 875 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 SLC12A1Q13621 1099 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 RAB30Q15771 203 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 KHDC1Q4VXA5 237 aaKnown RBP6.17□□□□□ -1.42
USP47-204ENST00000525078 FAM26FQ5R3K3 315 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 HLA-DQA1Q5Y7H0 255 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 CDPF1Q6NVV7 123 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 KLHL17Q6TDP4 642 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 FAM180AQ6UWF9 173 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 RIOX2Q8IUF8 465 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 NDUFAF2Q8N183 169 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 Q8N1Y9 231 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 MFSD4AQ8N468 514 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 GLB1L3Q8NCI6 653 aaPredicted RBP6.17□□□□□ -1.42
USP47-204ENST00000525078 CCDC150Q8NCX0 1101 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 ASB15Q8WXK1 588 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 RAB24Q969Q5 203 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 ZUFSPQ96AP4 578 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 ASIC4Q96FT7 647 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 LRRC46Q96FV0 321 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 RADILQ96JH8 1075 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 CDHR1Q96JP9 859 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 SNX22Q96L94 193 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 C7orf26Q96N11 449 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 MPHOSPH8Q99549 860 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 VRK1Q99986 396 aaPredicted RBP6.17□□□□□ -1.42
USP47-204ENST00000525078 MRPL18Q9H0U6 180 aaKnown RBP6.17□□□□□ -1.42
USP47-204ENST00000525078 ELAC1Q9H777 363 aaKnown RBP6.17□□□□□ -1.42
USP47-204ENST00000525078 SEPSECSQ9HD40 501 aaKnown RBP6.17□□□□□ -1.42
USP47-204ENST00000525078 KCND1Q9NSA2 647 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 COL20A1Q9P218 1284 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 GIMAP2Q9UG22 337 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 SRP68Q9UHB9 627 aaKnown RBP6.17□□□□□ -1.42
USP47-204ENST00000525078 ACAD8Q9UKU7 415 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 SYNPO2Q9UMS6 1093 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 PCDHA1Q9Y5I3 950 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 IGF1RP08069 1367 aa6.17□□□□□ -1.42
USP47-204ENST00000525078 FAM234BA2RU67 622 aa6.16□□□□□ -1.42
USP47-204ENST00000525078 PRAMEF22A3QJZ6 481 aa6.16□□□□□ -1.42
USP47-204ENST00000525078 GNAT3A8MTJ3 354 aa6.16□□□□□ -1.42
USP47-204ENST00000525078 PIP5K1BO14986 540 aa6.16□□□□□ -1.42
USP47-204ENST00000525078 DOK2O60496 412 aa6.16□□□□□ -1.42
USP47-204ENST00000525078 ANXA2P07355 339 aaKnown RBP6.16□□□□□ -1.42
USP47-204ENST00000525078 EN2P19622 333 aaPredicted RBP6.16□□□□□ -1.42
USP47-204ENST00000525078 AMPD1P23109 780 aa6.16□□□□□ -1.42
USP47-204ENST00000525078 AOAHP28039 575 aa6.16□□□□□ -1.42
USP47-204ENST00000525078 ATICP31939 592 aa6.16□□□□□ -1.42
USP47-204ENST00000525078 PREPP48147 710 aa6.16□□□□□ -1.42
USP47-204ENST00000525078 POLD2P49005 469 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms