RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ALG13Q9NP73 1137 aaKnown RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 OLFML3Q9NRN5 406 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 TBC1D13Q9NVG8 400 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 SEL1LQ9UBV2 794 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 AGO2Q9UKV8 859 aaKnown RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 PRG3Q9Y2Y8 225 aaPredicted RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 INSL6Q9Y581 213 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 PCDHB13Q9Y5F0 798 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 EVPLQ92817 2033 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 COL4A6Q14031 1691 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 MYH9P35579 1960 aaKnown RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 TET1Q8NFU7 2136 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 A0A0B4J269 797 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 LACTBL1A8MY62 500 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 H0YCG3 227 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 GOLGA6L22H0YM25 854 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 I3L4J1 428 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 OGTO15294 1046 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 FAM189A1O60320 539 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 ZNF623O75123 536 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 RHOBTB3O94955 611 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 SMC2O95347 1197 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 EOMESO95936 686 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 ADRB2P07550 413 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 LINC00271P0C7V0 271 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 MCF2P10911 925 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 DNAJB1P25685 340 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 CA8P35219 290 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 GRM5P41594 1212 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 OR1G1P47890 313 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 SLC11A1P49279 550 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 CASP4P49662 377 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 RAB27AP51159 221 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 SOX4Q06945 474 aaPredicted RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 MCL1Q07820 350 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 RAB30Q15771 203 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 CCDC85BQ15834 202 aaPredicted RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 ENOX2Q16206 610 aaKnown RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 KNOP1Q1ED39 458 aaKnown RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 SLC10A6Q3KNW5 377 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 EPC2Q52LR7 807 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 ZNF697Q5TEC3 545 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 CEP135Q66GS9 1140 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 JADE1Q6IE81 842 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 KANK3Q6NY19 840 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 CAVIN1Q6NZI2 390 aaKnown RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 CNNM4Q6P4Q7 775 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 CRELD2Q6UXH1 353 aaPredicted RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 ZPBP2Q6X784 338 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 CBWD2Q8IUF1 395 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 ZNF710Q8N1W2 664 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 KLHL23Q8NBE8 558 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 COLGALT1Q8NBJ5 622 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 GSTCDQ8NEC7 633 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 ZNF507Q8TCN5 953 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 URGCPQ8TCY9 931 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 AUTS2Q8WXX7 1259 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 CCDC47Q96A33 483 aaKnown RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 PGBD4Q96DM1 585 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 B3GALT6Q96L58 329 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 SNX27Q96L92 541 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 TIGD1Q96MW7 591 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 ACAP3Q96P50 834 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 TGS1Q96RS0 853 aaKnown RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 RPS6KC1Q96S38 1066 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 POP1Q99575 1024 aaKnown RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 CCDC94Q9BW85 323 aaPredicted RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 TMEM117Q9H0C3 514 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 NUP62CLQ9H1M0 184 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 SEMA6BQ9H3T3 888 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 ST6GALNAC4Q9H4F1 302 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 ELAC1Q9H777 363 aaKnown RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 MMRN2Q9H8L6 949 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 RPF1Q9H9Y2 349 aaKnown RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 RC3H2Q9HBD1 1191 aaKnown RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.02□□□□□ -1.613e-10■■■■■ 130.4
CHMP4A-202ENST00000524955 AGPAT3Q9NRZ7 376 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 TOPORSQ9NS56 1045 aaPredicted RBP5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 TMEM63CQ9P1W3 806 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 TUBGCP4Q9UGJ1 667 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 EXOC7Q9UPT5 735 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 CTNND2Q9UQB3 1225 aa5.02□□□□□ -1.61
CHMP4A-202ENST00000524955 WDR81Q562E7 1941 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 PTPRJQ12913 1337 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 SMIM28A0A1B0GU29 152 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 A0A1W2PPC1 479 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 C2CD2LO14523 706 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 NRP1O14786 923 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 PPEF2O14830 753 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 GRM6O15303 877 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 EIF3DO15371 548 aaKnown RBP eCLIP5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 EXOC3O60645 756 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 FGF18O76093 207 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 PIGRP01833 764 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 ITGB1P05556 798 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 THP07101 528 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 NFICP08651 508 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 SKIP12755 728 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 IRS1P35568 1242 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 BMPR1AP36894 532 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms