RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 NCDNQ9UBB6 729 aa2.55□□□□□ -2
CD44-212ENST00000524922 MSRAQ9UJ68 235 aa2.55□□□□□ -2
CD44-212ENST00000524922 NUMBLQ9Y6R0 609 aa2.55□□□□□ -2
CD44-212ENST00000524922 RIMS1Q86UR5 1692 aaKnown RBP2.54□□□□□ -2
CD44-212ENST00000524922 ATP10BO94823 1461 aa2.54□□□□□ -2
CD44-212ENST00000524922 PLCH2O75038 1416 aa2.54□□□□□ -2
CD44-212ENST00000524922 ZMYM3Q14202 1370 aa2.54□□□□□ -2
CD44-212ENST00000524922 NRP1O14786 923 aa2.54□□□□□ -2
CD44-212ENST00000524922 B3GALT2O43825 422 aa2.54□□□□□ -2
CD44-212ENST00000524922 KPNA6O60684 536 aa2.54□□□□□ -2
CD44-212ENST00000524922 TOM1O60784 492 aa2.54□□□□□ -2
CD44-212ENST00000524922 NCR1O76036 304 aa2.54□□□□□ -2
CD44-212ENST00000524922 APOL3O95236 402 aa2.54□□□□□ -2
CD44-212ENST00000524922 APPP05067 770 aa2.54□□□□□ -2
CD44-212ENST00000524922 CD40P25942 277 aa2.54□□□□□ -2
CD44-212ENST00000524922 ADCYAP1R1P41586 468 aa2.54□□□□□ -2
CD44-212ENST00000524922 GPR15P49685 360 aa2.54□□□□□ -2
CD44-212ENST00000524922 GZMKP49863 264 aa2.54□□□□□ -2
CD44-212ENST00000524922 FOXI1Q12951 378 aa2.54□□□□□ -2
CD44-212ENST00000524922 SF3A1Q15459 793 aaKnown RBP2.54□□□□□ -2
CD44-212ENST00000524922 NFE2L2Q16236 605 aa2.54□□□□□ -2
CD44-212ENST00000524922 CCDC178Q5BJE1 867 aa2.54□□□□□ -2
CD44-212ENST00000524922 FAM102AQ5T9C2 384 aaPredicted RBP2.54□□□□□ -2
CD44-212ENST00000524922 HECTD2Q5U5R9 776 aa2.54□□□□□ -2
CD44-212ENST00000524922 IQSEC1Q6DN90 963 aa2.54□□□□□ -2
CD44-212ENST00000524922 CCDC62Q6P9F0 684 aa2.54□□□□□ -2
CD44-212ENST00000524922 ABHD15Q6UXT9 468 aa2.54□□□□□ -2
CD44-212ENST00000524922 UBE2R2Q712K3 238 aaPredicted RBP2.54□□□□□ -2
CD44-212ENST00000524922 GDF7Q7Z4P5 450 aa2.54□□□□□ -2
CD44-212ENST00000524922 FAM83AQ86UY5 434 aa2.54□□□□□ -2
CD44-212ENST00000524922 SYNPOQ8N3V7 929 aa2.54□□□□□ -2
CD44-212ENST00000524922 GLB1L3Q8NCI6 653 aaPredicted RBP2.54□□□□□ -2
CD44-212ENST00000524922 GAB3Q8WWW8 586 aa2.54□□□□□ -2
CD44-212ENST00000524922 NINJ1Q92982 152 aa2.54□□□□□ -2
CD44-212ENST00000524922 ARL8AQ96BM9 186 aa2.54□□□□□ -2
CD44-212ENST00000524922 IL17RAQ96F46 866 aa2.54□□□□□ -2
CD44-212ENST00000524922 CEP95Q96GE4 821 aa2.54□□□□□ -2
CD44-212ENST00000524922 CPPED1Q9BRF8 314 aaPredicted RBP2.54□□□□□ -2
CD44-212ENST00000524922 WDR26Q9H7D7 661 aa2.54□□□□□ -2
CD44-212ENST00000524922 PRSS50Q9UI38 385 aa2.54□□□□□ -2
CD44-212ENST00000524922 SYNPO2Q9UMS6 1093 aa2.54□□□□□ -2
CD44-212ENST00000524922 KDM5DQ9BY66 1539 aa2.53□□□□□ -2
CD44-212ENST00000524922 PRXQ9BXM0 1461 aa2.53□□□□□ -2
CD44-212ENST00000524922 FAM135BQ49AJ0 1406 aa2.53□□□□□ -2
CD44-212ENST00000524922 ATRNL1Q5VV63 1379 aa2.53□□□□□ -2
CD44-212ENST00000524922 GAGE12BA1L429 117 aa2.53□□□□□ -2
CD44-212ENST00000524922 GAGE12HA6NDE8 117 aa2.53□□□□□ -2
CD44-212ENST00000524922 GSG1L2A8MUP6 293 aa2.53□□□□□ -2
CD44-212ENST00000524922 RHOBTB3O94955 611 aa2.53□□□□□ -2
CD44-212ENST00000524922 LAG3P18627 525 aa2.53□□□□□ -2
CD44-212ENST00000524922 FLT3P36888 993 aa2.53□□□□□ -2
CD44-212ENST00000524922 BMPR1AP36894 532 aa2.53□□□□□ -2
CD44-212ENST00000524922 SEC24CP53992 1094 aa2.53□□□□□ -2
CD44-212ENST00000524922 TAP1Q03518 808 aa2.53□□□□□ -2
CD44-212ENST00000524922 PDCD1Q15116 288 aa2.53□□□□□ -2
CD44-212ENST00000524922 PTPAQ15257 358 aa2.53□□□□□ -2
CD44-212ENST00000524922 PDCD4Q53EL6 469 aaKnown RBP2.53□□□□□ -2
CD44-212ENST00000524922 C19orf54Q5BKX5 351 aa2.53□□□□□ -2
CD44-212ENST00000524922 PITRM1Q5JRX3 1037 aa2.53□□□□□ -2
CD44-212ENST00000524922 KCNV1Q6PIU1 500 aa2.53□□□□□ -2
CD44-212ENST00000524922 ESPNLQ6ZVH7 1005 aa2.53□□□□□ -2
CD44-212ENST00000524922 SREK1Q8WXA9 508 aaKnown RBP2.53□□□□□ -2
CD44-212ENST00000524922 FUBP1Q96AE4 644 aaKnown RBP2.53□□□□□ -2
CD44-212ENST00000524922 TARS2Q9BW92 718 aaKnown RBP2.53□□□□□ -2
CD44-212ENST00000524922 WDR11Q9BZH6 1224 aa2.53□□□□□ -2
CD44-212ENST00000524922 WNT8AQ9H1J5 351 aa2.53□□□□□ -2
CD44-212ENST00000524922 AKIP1Q9NQ31 210 aa2.53□□□□□ -2
CD44-212ENST00000524922 ANKFY1Q9P2R3 1169 aa2.53□□□□□ -2
CD44-212ENST00000524922 DEPDC5O75140 1603 aa2.53□□□□□ -2
CD44-212ENST00000524922 SAMD9Q5K651 1589 aa2.53□□□□□ -2.01
CD44-212ENST00000524922 LRRC9Q6ZRR7 1453 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 FGD6Q6ZV73 1430 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 PNPLA7Q6ZV29 1317 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 SALL3Q9BXA9 1300 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 A0A087X0B3 334 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 ZAR1LA6NP61 321 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 TBKBP1A7MCY6 615 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 PPFIA2O75334 1257 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 RECQL4O94761 1208 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 NUDT3O95989 172 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 ELANEP08246 267 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 LTA4HP09960 611 aaKnown RBP2.52□□□□□ -2.01
CD44-212ENST00000524922 EGR2P11161 476 aaPredicted RBP2.52□□□□□ -2.01
CD44-212ENST00000524922 GYPEP15421 78 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 LSSP48449 732 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 HSPA2P54652 639 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 C21orf58P58505 322 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 KRTAP10-11P60412 298 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 NHLH2Q02577 135 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 MGAT5Q09328 741 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 C21orf62-AS1Q17RA5 79 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 BMT2Q1RMZ1 405 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 CCDC144BQ3MJ40 725 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 TIGD2Q4W5G0 525 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 PRR16Q569H4 304 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 DALRD3Q5D0E6 543 aaKnown RBP2.52□□□□□ -2.01
CD44-212ENST00000524922 MFSD14BQ5SR56 506 aa2.52□□□□□ -2.01
CD44-212ENST00000524922 ZNF362Q5T0B9 420 aaPredicted RBP2.52□□□□□ -2.01
CD44-212ENST00000524922 KIAA0907Q7Z7F0 614 aaPredicted RBP2.52□□□□□ -2.01
CD44-212ENST00000524922 ADGRG3Q86Y34 549 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms