RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 CCDC178Q5BJE1 867 aa7.35□□□□□ -1.23
SKP1-213ENST00000524288 NPNTQ6UXI9 565 aa7.35□□□□□ -1.23
SKP1-213ENST00000524288 SAMD3Q8N6K7 520 aa7.35□□□□□ -1.23
SKP1-213ENST00000524288 PIK3C3Q8NEB9 887 aa7.35□□□□□ -1.23
SKP1-213ENST00000524288 WDR92Q96MX6 357 aa7.35□□□□□ -1.23
SKP1-213ENST00000524288 TCAF1Q9Y4C2 921 aa7.35□□□□□ -1.23
SKP1-213ENST00000524288 NR2E3Q9Y5X4 410 aa7.35□□□□□ -1.23
SKP1-213ENST00000524288 COMMD10Q9Y6G5 202 aa7.35□□□□□ -1.23
SKP1-213ENST00000524288 ZBED1O96006 694 aa7.34□□□□□ -1.23
SKP1-213ENST00000524288 FTLP02792 175 aaPredicted RBP7.34□□□□□ -1.23
SKP1-213ENST00000524288 CTSSP25774 331 aa7.34□□□□□ -1.23
SKP1-213ENST00000524288 ZXDAP98168 799 aa7.34□□□□□ -1.23
SKP1-213ENST00000524288 CXXC5Q7LFL8 322 aaKnown RBP7.34□□□□□ -1.23
SKP1-213ENST00000524288 GPR156Q8NFN8 814 aa7.34□□□□□ -1.23
SKP1-213ENST00000524288 RGMAQ96B86 450 aa7.34□□□□□ -1.23
SKP1-213ENST00000524288 C7orf25Q9BPX7 421 aa7.34□□□□□ -1.23
SKP1-213ENST00000524288 CARD11Q9BXL7 1154 aa7.34□□□□□ -1.23
SKP1-213ENST00000524288 DEF6Q9H4E7 631 aa7.34□□□□□ -1.23
SKP1-213ENST00000524288 ARMT1Q9H993 441 aa7.34□□□□□ -1.23
SKP1-213ENST00000524288 FBXO10Q9UK96 956 aa7.34□□□□□ -1.23
SKP1-213ENST00000524288 PCDHB1Q9Y5F3 818 aa7.34□□□□□ -1.23
SKP1-213ENST00000524288 FAM227AF5H4B4 570 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 PQBP1O60828 265 aaKnown RBP7.33□□□□□ -1.24
SKP1-213ENST00000524288 ZNF623O75123 536 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 MAP2K6P52564 334 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 DSC2Q02487 901 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 MGAT2Q10469 447 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 CDSNQ15517 529 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 C10orf62Q5T681 223 aaPredicted RBP7.33□□□□□ -1.24
SKP1-213ENST00000524288 SRGAP1Q7Z6B7 1085 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 MSL3Q8N5Y2 521 aaKnown RBP7.33□□□□□ -1.24
SKP1-213ENST00000524288 FBXO18Q8NFZ0 1043 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 NT5C1BQ96P26 610 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 LMF1Q96S06 567 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 ZNF700Q9H0M5 742 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 BHMT2Q9H2M3 363 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 LDAHQ9H6V9 325 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 TLR9Q9NR96 1032 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 STAP2Q9UGK3 403 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 TAGLN3Q9UI15 199 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 PHTF1Q9UMS5 762 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 DAAM1Q9Y4D1 1078 aa7.33□□□□□ -1.24
SKP1-213ENST00000524288 A0A1W2PR48 441 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 MAFO75444 373 aaPredicted RBP7.32□□□□□ -1.24
SKP1-213ENST00000524288 HMGCRP04035 888 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 GAAP10253 952 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 PHKG2P15735 406 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 SERPINB3P29508 390 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 WASP42768 502 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 RRADP55042 308 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 ADAM15Q13444 863 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 TOP3AQ13472 1001 aaPredicted RBP7.32□□□□□ -1.24
SKP1-213ENST00000524288 UBE3CQ15386 1083 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 HS1BP3Q53T59 392 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 ZMAT1Q5H9K5 638 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 SWSAP1Q6NVH7 229 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 SKAP1Q86WV1 359 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 DRC7Q8IY82 874 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 PPP1R14CQ8TAE6 165 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 NKD2Q969F2 451 aaPredicted RBP7.32□□□□□ -1.24
SKP1-213ENST00000524288 UIMC1Q96RL1 719 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 ARPC5LQ9BPX5 153 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 TMEM60Q9H2L4 133 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 FAM184BQ9ULE4 1060 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 TESMINQ9Y4I5 508 aa7.32□□□□□ -1.24
SKP1-213ENST00000524288 ANO9A1A5B4 782 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 FSBPO95073 299 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 LTA4HP09960 611 aaKnown RBP7.31□□□□□ -1.24
SKP1-213ENST00000524288 ETV4P43268 484 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 SLC6A9P48067 706 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 CNN3Q15417 329 aaKnown RBP7.31□□□□□ -1.24
SKP1-213ENST00000524288 LONRF1Q17RB8 773 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 Q6ZVL8 140 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 LARP4Q71RC2 724 aaKnown RBP eCLIP7.31□□□□□ -1.24
SKP1-213ENST00000524288 GPR155Q7Z3F1 870 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 DAAM2Q86T65 1068 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 RTKN2Q8IZC4 609 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 PLBD2Q8NHP8 589 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 KLHDC4Q8TBB5 520 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 CCHCR1Q8TD31 782 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 SH3RF3Q8TEJ3 882 aaPredicted RBP7.31□□□□□ -1.24
SKP1-213ENST00000524288 STRBPQ96SI9 672 aaKnown RBP7.31□□□□□ -1.24
SKP1-213ENST00000524288 PTPN18Q99952 460 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 NAA15Q9BXJ9 866 aaKnown RBP7.31□□□□□ -1.24
SKP1-213ENST00000524288 KIAA1683Q9H0B3 1180 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 MSL2Q9HCI7 577 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 KMT5AQ9NQR1 393 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 POLHQ9Y253 713 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 SIK3Q9Y2K2 1263 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 STXBP5LQ9Y2K9 1186 aa7.31□□□□□ -1.24
SKP1-213ENST00000524288 RPTORQ8N122 1335 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 FAM171A2A8MVW0 826 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 MUSKO15146 869 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 ADCY6O43306 1168 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 SLC5A1P13866 664 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 ECHS1P30084 290 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 PER3P56645 1201 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 TARDBPQ13148 414 aaKnown RBP eCLIP7.3□□□□□ -1.24
SKP1-213ENST00000524288 ACAP1Q15027 740 aa7.3□□□□□ -1.24
SKP1-213ENST00000524288 R3HDM1Q15032 1099 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms