RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 TPBGLP0DKB5 382 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 SNHG28P0DPA3 235 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 ACTN1P12814 892 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 CYP11B2P19099 503 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 ITIH2P19823 946 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 TNFAIP3P21580 790 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 COILP38432 576 aaPredicted RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 SSR1P43307 286 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 CTCFP49711 727 aaPredicted RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 VEGFBP49765 207 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 PEX5P50542 639 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 PAPOLAP51003 745 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 RAB27AP51159 221 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 RPS6KA3P51812 740 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 POLGP54098 1239 aaPredicted RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 CACNB3P54284 484 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 SLC12A3P55017 1021 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 SH3BGRP55822 239 aaPredicted RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 IL9RQ01113 521 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 RNASELQ05823 741 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 KLC1Q07866 573 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 STRN3Q13033 797 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 DYNC1I2Q13409 638 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 RRP1BQ14684 758 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 SETDB1Q15047 1291 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 ECM1Q16610 540 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 DCAF8Q5TAQ9 597 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 SEL1L2Q5TEA6 688 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 ANO7Q6IWH7 933 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 CYP4F22Q6NT55 531 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 APOBEC3HQ6NTF7 200 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 RHBDF2Q6PJF5 856 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 MTHFD1LQ6UB35 978 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 C16orf86Q6ZW13 317 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 INTS8Q75QN2 995 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 SAPCD2Q86UD0 394 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 SLC13A5Q86YT5 568 aaPredicted RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 SLFN12Q8IYM2 578 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 SPICE1Q8N0Z3 855 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 ANKRD35Q8N283 1001 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 ARHGAP18Q8N392 663 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 FITM2Q8N6M3 262 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 BBOF1Q8ND07 529 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 ERMNQ8TAM6 284 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 WDR66Q8TBY9 1149 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 EPS8L3Q8TE67 593 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 PIGOQ8TEQ8 1089 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 DYDC1Q8WWB3 177 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 HAS1Q92839 578 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 ARHGEF2Q92974 986 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 SLC35C1Q96A29 364 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 CDCA5Q96FF9 252 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 TEPSINQ96N21 525 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 TSC22D3Q99576 134 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 NUDT12Q9BQG2 462 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 CCDC77Q9BR77 488 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 FAM192AQ9GZU8 254 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 VCXQ9H320 206 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 SEMA4AQ9H3S1 761 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 LRRC19Q9H756 370 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 PPCSQ9HAB8 311 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 GOPCQ9HD26 462 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 ERVK-5Q9HDB9 667 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 FGFR1OP2Q9NVK5 253 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 NKIRAS1Q9NYS0 192 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 BIN2Q9UBW5 565 aaPredicted RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 DDX25Q9UHL0 483 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 LNPEPQ9UIQ6 1025 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 USP20Q9Y2K6 914 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 NR2E1Q9Y466 385 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 ALG6Q9Y672 507 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 TLL2Q9Y6L7 1015 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 USH1CQ9Y6N9 552 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 PTPRFP10586 1907 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 PHIPQ8WWQ0 1821 aa5.3□□□□□ -1.56
CTNNA1-241ENST00000524127 BAZ2BQ9UIF8 2168 aaKnown RBP5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 MYO3BQ8WXR4 1341 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 NAV1Q8NEY1 1877 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 PNMA6FA0A0J9YX94 578 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 EME2A4GXA9 379 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 POTEMA6NI47 508 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 NDC80O14777 642 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 FSCN2O14926 492 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 P4HA2O15460 535 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 PRPF4O43172 522 aaKnown RBP eCLIP5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 SORBS3O60504 671 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 AOC2O75106 756 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 CDH16O75309 829 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 ECM2O94769 699 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 RTN3O95197 1032 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 ECEL1O95672 775 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 TTC4O95801 387 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 NR3C1P04150 777 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 KRT18P05783 430 aaKnown RBP5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 PLCG2P16885 1265 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 TAC1P20366 129 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 IBSPP21815 317 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 ALDH3A1P30838 453 aa5.29□□□□□ -1.56
CTNNA1-241ENST00000524127 PSMC2P35998 433 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms