RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 CBWD3Q5JTY5 395 aa10.15□□□□□ -0.79
SDCBP-212ENST00000523483 CBWD5Q5RIA9 395 aa10.15□□□□□ -0.79
SDCBP-212ENST00000523483 SLC39A5Q6ZMH5 540 aa10.15□□□□□ -0.79
SDCBP-212ENST00000523483 CACNA2D4Q7Z3S7 1137 aa10.15□□□□□ -0.79
SDCBP-212ENST00000523483 USP37Q86T82 979 aa10.15□□□□□ -0.79
SDCBP-212ENST00000523483 LSM14BQ9BX40 385 aaKnown RBP10.15□□□□□ -0.79
SDCBP-212ENST00000523483 IFIH1Q9BYX4 1025 aaKnown RBP10.15□□□□□ -0.79
SDCBP-212ENST00000523483 TMEM39AQ9NV64 488 aa10.15□□□□□ -0.79
SDCBP-212ENST00000523483 DMAC2Q9NW81 257 aa10.15□□□□□ -0.79
SDCBP-212ENST00000523483 CGNQ9P2M7 1197 aaKnown RBP10.15□□□□□ -0.79
SDCBP-212ENST00000523483 TNFSF13BQ9Y275 285 aa10.15□□□□□ -0.79
SDCBP-212ENST00000523483 R3HCC1Q9Y3T6 440 aaKnown RBP10.15□□□□□ -0.79
SDCBP-212ENST00000523483 LDHAP00338 332 aaKnown RBP10.14□□□□□ -0.79
SDCBP-212ENST00000523483 TPM1P09493 284 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 ACTN1P12814 892 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 HOXA11P31270 313 aaPredicted RBP10.14□□□□□ -0.79
SDCBP-212ENST00000523483 HOXC8P31273 242 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 WNT7BP56706 349 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 MYL7Q01449 175 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 CYP24A1Q07973 514 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 RAPGEF1Q13905 1077 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 NECAB2Q7Z6G3 386 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 FAM126BQ8IXS8 530 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 TMEM130Q8N3G9 435 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 PLEKHO2Q8TD55 490 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 C11orf49Q9H6J7 331 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 LAMA3Q16787 3333 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 LRRN2O75325 713 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 PPP3CAQ08209 521 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 EXOC3L4Q17RC7 722 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 SLC27A1Q6PCB7 646 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 SLC9A9Q8IVB4 645 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 LPPQ93052 612 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 MKNK1Q9BUB5 465 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 CCDC94Q9BW85 323 aaPredicted RBP10.14□□□□□ -0.79
SDCBP-212ENST00000523483 NFKBIZQ9BYH8 718 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 AGPAT5Q9NUQ2 364 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 INPP5FQ9Y2H2 1132 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 A0A1B0GUA9 196 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 TMEM191BP0C7N4 346 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 SLC9A1P19634 815 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 YARSP54577 528 aaKnown RBP10.14□□□□□ -0.79
SDCBP-212ENST00000523483 CETN1Q12798 172 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 LRRC8DQ7L1W4 858 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 VSTM4Q8IW00 320 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 ACAP3Q96P50 834 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 ADAM2Q99965 735 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 PI4K2AQ9BTU6 479 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 MTMR12Q9C0I1 747 aa10.14□□□□□ -0.79
SDCBP-212ENST00000523483 LRRIQ3A6PVS8 624 aaPredicted RBP10.13□□□□□ -0.79
SDCBP-212ENST00000523483 GPR182O15218 404 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 CASP14P31944 242 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 USP8P40818 1118 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 FMO5P49326 533 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 GUCY2FP51841 1108 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 POU5F1BQ06416 359 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 MCL1Q07820 350 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 BFSP2Q13515 415 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 LPIN1Q14693 890 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 FBXO47Q5MNV8 452 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 CRELD2Q6UXH1 353 aaPredicted RBP10.13□□□□□ -0.79
SDCBP-212ENST00000523483 NEK11Q8NG66 645 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 PARD3BQ8TEW8 1205 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 POLR2FP61218 127 aaKnown RBP10.13□□□□□ -0.79
SDCBP-212ENST00000523483 SNRPFP62306 86 aaKnown RBP10.13□□□□□ -0.79
SDCBP-212ENST00000523483 GJB7Q6PEY0 223 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 RNF39Q9H2S5 420 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 KIAA1586Q9HCI6 787 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 LRRC10BA6NIK2 292 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 MEIS3P2A8K0S8 358 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 RECQL4O94761 1208 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 PIGRP01833 764 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 SELPP16109 830 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 SCP2P22307 547 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 PTPN11Q06124 597 aaPredicted RBP10.13□□□□□ -0.79
SDCBP-212ENST00000523483 RBL2Q08999 1139 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 ARHGAP44Q17R89 818 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 LRRC26Q2I0M4 334 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 GBP6Q6ZN66 633 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 C12orf56Q8IXR9 622 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 OR5B17Q8NGF7 314 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 CRISPLD2Q9H0B8 497 aa10.13□□□□□ -0.79
SDCBP-212ENST00000523483 PIK3CAP42336 1068 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
SDCBP-212ENST00000523483 PPP2R3AQ06190 1150 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 RRAGAQ7L523 313 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 APBB1IPQ7Z5R6 666 aaPredicted RBP10.12□□□□□ -0.79
SDCBP-212ENST00000523483 PPM1KQ8N3J5 372 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 TAS1R2Q8TE23 839 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 KIF12Q96FN5 646 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 ZFP42Q96MM3 310 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 PTPRJQ12913 1337 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 MROH7Q68CQ1 1323 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 LACTBL1A8MY62 500 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 EPHB6O15197 1021 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 CLTAP09496 248 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 MCF2P10911 925 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 FAM187BQ17R55 369 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 SV2AQ7L0J3 742 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 IFNLR1Q8IU57 520 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms