RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 GOLGA8MH3BSY2 632 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 GOLGA8RI6L899 631 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 ZCCHC18P0CG32 403 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 AKR1B1P15121 316 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 UBXN2AP68543 259 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 OVGP1Q12889 678 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 GRIK3Q13003 919 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 SNX30Q5VWJ9 437 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 SLFN13Q68D06 897 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 ST13P4Q8IZP2 240 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-212ENST00000523387 ATL2Q8NHH9 583 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 NT5C1BQ96P26 610 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 TBC1D10AQ9BXI6 508 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 AMNQ9BXJ7 453 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 KIAA1683Q9H0B3 1180 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 LRRC4CQ9HCJ2 640 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 TRAF3IP3Q9Y228 551 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 C5P01031 1676 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 RPTORQ8N122 1335 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 M0R2N6 131 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 SGK1O00141 431 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 DDX3YO15523 660 aaKnown RBP9.61□□□□□ -0.87
CSMD1-212ENST00000523387 ATP9AO75110 1047 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 CAMTA2O94983 1202 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 ATP6V1C1P21283 382 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 LMNB2Q03252 620 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 QRICH1Q2TAL8 776 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 WDR44Q5JSH3 913 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 RBBP8NLQ8NC74 664 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-212ENST00000523387 CNKSR1Q969H4 720 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 HAUS1Q96CS2 278 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 SYNCQ9H7C4 482 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 ARHGEF3Q9NR81 526 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 ZDHHC18Q9NUE0 388 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 G3BP2Q9UN86 482 aaKnown RBP9.61□□□□□ -0.87
CSMD1-212ENST00000523387 IGSF9BQ9UPX0 1349 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 hCG_2014768A0A024R1R8 64 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 MT-ND3P03897 115 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 PGM1P36871 562 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 MAGEA4P43358 317 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 CACNA2D1P54289 1103 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 KCNA1Q09470 495 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.61□□□□□ -0.87
CSMD1-212ENST00000523387 DCUN1D2Q6PH85 259 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 ZDHHC24Q6UX98 284 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 ECHDC2Q86YB7 292 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 ZBED8Q8IZ13 594 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 B4GALNT2Q8NHY0 566 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 TTC8Q8TAM2 541 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 JMJD4Q9H9V9 463 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 ARHGEF10LQ9HCE6 1279 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 WHRNQ9P202 907 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 SERPINB13Q9UIV8 391 aa9.61□□□□□ -0.87
CSMD1-212ENST00000523387 SMG5Q9UPR3 1016 aaKnown RBP9.61□□□□□ -0.87
CSMD1-212ENST00000523387 FOSP01100 380 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-212ENST00000523387 RNF43Q68DV7 783 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 LVRNQ6Q4G3 990 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 CENPUQ71F23 418 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 SLFN11Q7Z7L1 901 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 MTDHQ86UE4 582 aaKnown RBP9.6□□□□□ -0.87
CSMD1-212ENST00000523387 APLFQ8IW19 511 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-212ENST00000523387 SUPT20HQ8NEM7 779 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 TBC1D16Q8TBP0 767 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 EIF2AK1Q9BQI3 630 aaKnown RBP9.6□□□□□ -0.87
CSMD1-212ENST00000523387 MTMR4Q9NYA4 1195 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 ANKFY1Q9P2R3 1169 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 PPARGC1AQ9UBK2 798 aaKnown RBP9.6□□□□□ -0.87
CSMD1-212ENST00000523387 PCYOX1Q9UHG3 505 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 LRCH1Q9Y2L9 728 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 CPA2P48052 419 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 VAMP7P51809 220 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 MARSP56192 900 aaKnown RBP9.6□□□□□ -0.87
CSMD1-212ENST00000523387 GTF2IP78347 998 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 TCP10Q12799 353 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 P3H1Q32P28 736 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 WASHC2DQ5SRD0 308 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 FAM13CQ8NE31 585 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 HAS1Q92839 578 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 SLCO1B3Q9NPD5 702 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 GGA1Q9UJY5 639 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 GTPBP10A4D1E9 387 aaKnown RBP9.6□□□□□ -0.87
CSMD1-212ENST00000523387 E7ENQ6 273 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 EYA4O95677 639 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 ACADSP16219 412 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 RPA1P27694 616 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 SMARCA1P28370 1054 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 PTPN4P29074 926 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 SH3BGRP55822 239 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-212ENST00000523387 ZNF543Q08ER8 600 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 BBS9Q3SYG4 887 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 SH2D4BQ5SQS7 431 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 C1orf146Q5VVC0 180 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 C11orf63Q6NUN7 778 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 IRGCQ6NXR0 463 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 FOXR2Q6PJQ5 311 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 C16orf86Q6ZW13 317 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 TXNRD3Q86VQ6 643 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 SMC1BQ8NDV3 1235 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 PYROXD1Q8WU10 500 aa9.6□□□□□ -0.87
CSMD1-212ENST00000523387 PWWP2AQ96N64 755 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms