RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 GLULP15104 373 aa25.25■■□□□ 1.63
PVT1-218ENST00000523328 GLRA2P23416 452 aa25.25■■□□□ 1.63
PVT1-218ENST00000523328 CREMQ03060 361 aa25.25■■□□□ 1.63
PVT1-218ENST00000523328 RTP2Q5QGT7 225 aa25.25■■□□□ 1.63
PVT1-218ENST00000523328 SLC27A1Q6PCB7 646 aa25.25■■□□□ 1.63
PVT1-218ENST00000523328 PRSS55Q6UWB4 352 aaPredicted RBP25.25■■□□□ 1.63
PVT1-218ENST00000523328 C1orf210Q8IVY1 113 aa25.25■■□□□ 1.63
PVT1-218ENST00000523328 HSD17B14Q9BPX1 270 aa25.25■■□□□ 1.63
PVT1-218ENST00000523328 EIF2AK1Q9BQI3 630 aaKnown RBP25.25■■□□□ 1.63
PVT1-218ENST00000523328 PAAF1Q9BRP4 392 aa25.25■■□□□ 1.63
PVT1-218ENST00000523328 TM6SF1Q9BZW5 370 aa25.25■■□□□ 1.63
PVT1-218ENST00000523328 KLK14Q9P0G3 267 aa25.25■■□□□ 1.63
PVT1-218ENST00000523328 VWA8A3KMH1 1905 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 STK36Q9NRP7 1315 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 A0A1B0GUA9 196 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 FAM205CA6NFA0 338 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 EPB41L2O43491 1005 aaKnown RBP25.24■■□□□ 1.63
PVT1-218ENST00000523328 DGAT1O75907 488 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 NPTXRO95502 500 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 STARD6P59095 220 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 SCRN1Q12765 414 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 KIAA2013Q8IYS2 634 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 PJA1Q8NG27 643 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 FGF14Q92915 247 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 FOXQ1Q9C009 403 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 ANKEF1Q9NU02 776 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 FBXW11Q9UKB1 542 aa25.24■■□□□ 1.63
PVT1-218ENST00000523328 ZFP37Q9Y6Q3 630 aaPredicted RBP25.24■■□□□ 1.63
PVT1-218ENST00000523328 COL4A3Q01955 1670 aa25.23■■□□□ 1.63
PVT1-218ENST00000523328 POTEMA6NI47 508 aa25.23■■□□□ 1.63
PVT1-218ENST00000523328 BAG4O95429 457 aaKnown RBP25.23■■□□□ 1.63
PVT1-218ENST00000523328 FSHRP23945 695 aa25.23■■□□□ 1.63
PVT1-218ENST00000523328 ZC3H14Q6PJT7 736 aaKnown RBP25.23■■□□□ 1.63
PVT1-218ENST00000523328 GRASPQ7Z6J2 395 aaPredicted RBP25.23■■□□□ 1.63
PVT1-218ENST00000523328 PARP2Q9UGN5 583 aa25.23■■□□□ 1.63
PVT1-218ENST00000523328 NOTCH4Q99466 2003 aa25.22■■□□□ 1.63
PVT1-218ENST00000523328 SF3B1O75533 1304 aaKnown RBP eCLIP25.22■■□□□ 1.637e-6■■■■■ 104.3
PVT1-218ENST00000523328 PATJQ8NI35 1801 aa25.22■■□□□ 1.63
PVT1-218ENST00000523328 DTNBO60941 627 aa25.22■■□□□ 1.63
PVT1-218ENST00000523328 TADA2AO75478 443 aa25.22■■□□□ 1.63
PVT1-218ENST00000523328 CDKL5O76039 1030 aa25.22■■□□□ 1.63
PVT1-218ENST00000523328 XBP1P17861 261 aa25.22■■□□□ 1.63
PVT1-218ENST00000523328 RARRES1P49788 294 aa25.22■■□□□ 1.63
PVT1-218ENST00000523328 GPC5P78333 572 aa25.22■■□□□ 1.63
PVT1-218ENST00000523328 HSP90AA2PQ14568 343 aaPredicted RBP25.22■■□□□ 1.63
PVT1-218ENST00000523328 PARM1Q6UWI2 310 aa25.22■■□□□ 1.63
PVT1-218ENST00000523328 MAML2Q8IZL2 1156 aaPredicted RBP25.22■■□□□ 1.63
PVT1-218ENST00000523328 CLSTN3Q9BQT9 956 aa25.22■■□□□ 1.63
PVT1-218ENST00000523328 CDH7Q9ULB5 785 aa25.22■■□□□ 1.63
PVT1-218ENST00000523328 GPR179Q6PRD1 2367 aa25.21■■□□□ 1.63
PVT1-218ENST00000523328 LRRN2O75325 713 aa25.21■■□□□ 1.63
PVT1-218ENST00000523328 NTHL1P78549 312 aa25.21■■□□□ 1.63
PVT1-218ENST00000523328 TUSC3Q13454 348 aa25.21■■□□□ 1.63
PVT1-218ENST00000523328 LNX1Q8TBB1 728 aaPredicted RBP25.21■■□□□ 1.63
PVT1-218ENST00000523328 HASPINQ8TF76 798 aa25.21■■□□□ 1.63
PVT1-218ENST00000523328 PDRG1Q9NUG6 133 aa25.21■■□□□ 1.63
PVT1-218ENST00000523328 MED19A0JLT2 244 aaPredicted RBP25.2■■□□□ 1.62
PVT1-218ENST00000523328 NR5A1Q13285 461 aa25.2■■□□□ 1.62
PVT1-218ENST00000523328 PIK3R5Q8WYR1 880 aa25.2■■□□□ 1.62
PVT1-218ENST00000523328 TNFRSF25Q93038 417 aa25.2■■□□□ 1.62
PVT1-218ENST00000523328 TTPALQ9BTX7 342 aa25.2■■□□□ 1.62
PVT1-218ENST00000523328 POLR3FQ9H1D9 316 aaPredicted RBP25.2■■□□□ 1.62
PVT1-218ENST00000523328 PCDHA12Q9UN75 941 aa25.2■■□□□ 1.62
PVT1-218ENST00000523328 KIF4AO95239 1232 aa25.19■■□□□ 1.62
PVT1-218ENST00000523328 HNRNPA1P09651 372 aaKnown RBP eCLIP25.19■■□□□ 1.62
PVT1-218ENST00000523328 PPP4R3CPQ6ZMV5 832 aa25.19■■□□□ 1.62
PVT1-218ENST00000523328 RUBCNQ92622 972 aa25.19■■□□□ 1.62
PVT1-218ENST00000523328 FGF13Q92913 245 aa25.19■■□□□ 1.62
PVT1-218ENST00000523328 SHDQ96IW2 340 aa25.19■■□□□ 1.62
PVT1-218ENST00000523328 DDX23Q9BUQ8 820 aaKnown RBP25.19■■□□□ 1.62
PVT1-218ENST00000523328 CASTOR2A6NHX0 329 aa25.18■■□□□ 1.62
PVT1-218ENST00000523328 PTGESO14684 152 aa25.18■■□□□ 1.62
PVT1-218ENST00000523328 C8AP07357 584 aa25.18■■□□□ 1.62
PVT1-218ENST00000523328 HOXA9P31269 272 aa25.18■■□□□ 1.62
PVT1-218ENST00000523328 SNW1Q13573 536 aaKnown RBP25.18■■□□□ 1.62
PVT1-218ENST00000523328 PSMD5Q16401 504 aa25.18■■□□□ 1.62
PVT1-218ENST00000523328 LIN9Q5TKA1 542 aa25.18■■□□□ 1.62
PVT1-218ENST00000523328 FAM171A1Q5VUB5 890 aa25.18■■□□□ 1.62
PVT1-218ENST00000523328 DGLUCYQ7Z3D6 616 aa25.18■■□□□ 1.62
PVT1-218ENST00000523328 DCLK2Q8N568 766 aa25.18■■□□□ 1.62
PVT1-218ENST00000523328 SUMF1Q8NBK3 374 aa25.18■■□□□ 1.62
PVT1-218ENST00000523328 PIGOQ8TEQ8 1089 aa25.18■■□□□ 1.62
PVT1-218ENST00000523328 GPRC5CQ9NQ84 441 aa25.18■■□□□ 1.62
PVT1-218ENST00000523328 A0A087WWV3 80 aa25.17■■□□□ 1.62
PVT1-218ENST00000523328 KANSL1LA0AUZ9 987 aa25.17■■□□□ 1.62
PVT1-218ENST00000523328 TTLL13PA6NNM8 815 aa25.17■■□□□ 1.62
PVT1-218ENST00000523328 ADAM12O43184 909 aa25.17■■□□□ 1.62
PVT1-218ENST00000523328 CTDNEP1O95476 244 aa25.17■■□□□ 1.62
PVT1-218ENST00000523328 NAB2Q15742 525 aa25.17■■□□□ 1.62
PVT1-218ENST00000523328 PPM1LQ5SGD2 360 aa25.17■■□□□ 1.62
PVT1-218ENST00000523328 MTSS1LQ765P7 747 aa25.17■■□□□ 1.62
PVT1-218ENST00000523328 CEP57Q86XR8 500 aa25.17■■□□□ 1.62
PVT1-218ENST00000523328 PRIMPOLQ96LW4 560 aa25.17■■□□□ 1.62
PVT1-218ENST00000523328 CCDC43Q96MW1 224 aaKnown RBP25.17■■□□□ 1.62
PVT1-218ENST00000523328 HINFPQ9BQA5 517 aa25.17■■□□□ 1.62
PVT1-218ENST00000523328 CXCL16Q9H2A7 254 aa25.17■■□□□ 1.62
PVT1-218ENST00000523328 TTC12Q9H892 705 aaPredicted RBP25.17■■□□□ 1.62
PVT1-218ENST00000523328 TRIP11Q15643 1979 aa25.16■■□□□ 1.62
PVT1-218ENST00000523328 LRRIQ4A6NIV6 560 aa25.16■■□□□ 1.62
PVT1-218ENST00000523328 CCL16O15467 120 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms