RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	TMEM176A	Q96HP8	235 aa		5.88	□□□□□ -1.47
CTNNA1-238	ENST00000523298	TMX3	Q96JJ7	454 aa		5.88	□□□□□ -1.47
CTNNA1-238	ENST00000523298	CLPTM1L	Q96KA5	538 aa		5.88	□□□□□ -1.47
CTNNA1-238	ENST00000523298	LSM14B	Q9BX40	385 aa	Known RBP	5.88	□□□□□ -1.47
CTNNA1-238	ENST00000523298	B3GNT5	Q9BYG0	378 aa		5.88	□□□□□ -1.47
CTNNA1-238	ENST00000523298	C12orf65	Q9H3J6	166 aa	Known RBP	5.88	□□□□□ -1.47
CTNNA1-238	ENST00000523298	HECA	Q9UBI9	543 aa	Predicted RBP	5.88	□□□□□ -1.47
CTNNA1-238	ENST00000523298	PUF60	Q9UHX1	559 aa	Known RBP	5.88	□□□□□ -1.47
CTNNA1-238	ENST00000523298	RUVBL1	Q9Y265	456 aa	Known RBP	5.88	□□□□□ -1.47
CTNNA1-238	ENST00000523298	PCDHA3	Q9Y5H8	950 aa		5.88	□□□□□ -1.47
CTNNA1-238	ENST00000523298	CFAP20	Q9Y6A4	193 aa	Known RBP	5.88	□□□□□ -1.47
CTNNA1-238	ENST00000523298	FRMPD2	Q68DX3	1309 aa	Predicted RBP	5.88	□□□□□ -1.47
CTNNA1-238	ENST00000523298	PNPLA7	Q6ZV29	1317 aa		5.88	□□□□□ -1.47
CTNNA1-238	ENST00000523298	GOLGA6C	A6NDK9	693 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	GOLGA6B	A6NDN3	693 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	NT5C1B-RDH14	C9J2C7	533 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	GPR42	O15529	346 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	FOXS1	O43638	330 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	SGTA	O43765	313 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	CDC14B	O60729	498 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	GPR32	O75388	356 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	SASH1	O94885	1247 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	GOLGA6D	P0CG33	693 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	GYPE	P15421	78 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	DDC	P20711	480 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	SLC6A4	P31645	630 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	PTPN7	P35236	360 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	NOG	Q13253	232 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	MRPL49	Q13405	166 aa	Known RBP	5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	AFMID	Q63HM1	303 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	TCTN3	Q6NUS6	607 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	BORA	Q6PGQ7	559 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	ARHGEF18	Q6ZSZ5	1173 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	CHST15	Q7LFX5	561 aa	Predicted RBP	5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	LIMS2	Q7Z4I7	341 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	FAM124A	Q86V42	546 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	TAX1BP1	Q86VP1	789 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	DENND1C	Q8IV53	801 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	DRC7	Q8IY82	874 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	RGMA	Q96B86	450 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	SLC39A13	Q96H72	371 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	UHRF1	Q96T88	793 aa	Predicted RBP	5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	ARNT2	Q9HBZ2	717 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	TDP1	Q9NUW8	608 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	USP40	Q9NVE5	1235 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	GOLGA6A	Q9NYA3	693 aa		5.87	□□□□□ -1.47
CTNNA1-238	ENST00000523298	CCDC194	A0A1B0GVG4	234 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	PMS2P1	A4D2B8	440 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	TPP1	O14773	563 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	ERC2	O15083	957 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	LAMTOR5	O43504	91 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	GAST	P01350	101 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	FTL	P02792	175 aa	Predicted RBP	5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	HTR1B	P28222	390 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	HK3	P52790	923 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	PER3	P56645	1201 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	JAG1	P78504	1218 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	APBA1	Q02410	837 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	SLC4A10	Q6U841	1118 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	NPNT	Q6UXI9	565 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	FRMD5	Q7Z6J6	570 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	CCDC146	Q8IYE0	955 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	KIAA0319L	Q8IZA0	1049 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	CAMKK1	Q8N5S9	505 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	FAM156A	Q8NDB6	213 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	FAM193B	Q96PV7	902 aa	Predicted RBP	5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	CPEB1	Q9BZB8	566 aa	Known RBP	5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	SEC61A2	Q9H9S3	476 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	ATP6V0A4	Q9HBG4	840 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	LANCL2	Q9NS86	450 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	C1orf112	Q9NSG2	853 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298	SH3BP1	Q9Y3L3	701 aa		5.86	□□□□□ -1.47
CTNNA1-238	ENST00000523298		A0A0G2JLL6	359 aa	Predicted RBP	5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298		A0A1W2PRX2	142 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	CXorf49	A8MYA2	514 aa	Predicted RBP	5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	APAF1	O14727	1248 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	HOXA3	O43365	443 aa	Predicted RBP	5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	MAL	P21145	153 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	GZMK	P49863	264 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	AGFG1	P52594	562 aa	Known RBP	5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	NKX6-1	P78426	367 aa	Predicted RBP	5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	FOXL1	Q12952	345 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	FLYWCH1	Q4VC44	716 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	SPOCD1	Q6ZMY3	1216 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	FUK	Q8N0W3	1084 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	KLHDC4	Q8TBB5	520 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	IL17RA	Q96F46	866 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	CDC5L	Q99459	802 aa	Known RBP	5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	SENP6	Q9GZR1	1112 aa	Predicted RBP	5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	TMEM60	Q9H2L4	133 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	BHMT2	Q9H2M3	363 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	ARMT1	Q9H993	441 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	PRDM11	Q9NQV5	511 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	DDX21	Q9NR30	783 aa	Known RBP eCLIP	5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	STAP2	Q9UGK3	403 aa		5.85	□□□□□ -1.47
CTNNA1-238	ENST00000523298	RCAN3	Q9UKA8	241 aa		5.85	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms