RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 ARID5AQ03989 594 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 ENOX2Q16206 610 aaKnown RBP16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 MAP3K21Q5TCX8 1036 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 ZNF410Q86VK4 478 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 ADAMTS10Q9H324 1103 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 ARHGAP20Q9P2F6 1191 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 TNFSF13BQ9Y275 285 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 ADGRG1Q9Y653 693 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 PTPRJQ12913 1337 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 OGTO15294 1046 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 P4HA2O15460 535 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 ZSCAN12O43309 604 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 GNRH1P01148 92 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 PNMA6AP0CW24 399 aaPredicted RBP16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 TNNI1P19237 187 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 FAM187BQ17R55 369 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 NBPF20Q3BBV1 942 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 KRT39Q6A163 491 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 REXO1L1PQ8IX06 675 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 THNSL1Q8IYQ7 743 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 CEP120Q8N960 986 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 ZNF516Q92618 1163 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 SEMA4DQ92854 862 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 OSMRQ99650 979 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 NUCKS1Q9H1E3 243 aaKnown RBP16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 CDT1Q9H211 546 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 SAGE1Q9NXZ1 904 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 DDX20Q9UHI6 824 aaKnown RBP16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 DNAJC12Q9UKB3 198 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 EPN1Q9Y6I3 576 aaPredicted RBP16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 CNTNAP2Q9UHC6 1331 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 HTTP42858 3142 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 A0A0U1RQJ8 604 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 GPR32O75388 356 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 ERLIN2O94905 339 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 NDUFA10O95299 355 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 ASGR1P07306 291 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 CCDC175P0C221 793 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 ARF4P18085 180 aaPredicted RBP16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 KCNA10Q16322 511 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 FAM47CQ5HY64 1035 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 PHLDB3Q6NSJ2 640 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 SV2AQ7L0J3 742 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 TAS1R2Q8TE23 839 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 ATRIPQ8WXE1 791 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 ELMO3Q96BJ8 720 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 FAM212AQ96EL1 285 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 APEX2Q9UBZ4 518 aa16.74■□□□□ 0.27
CTNNA1-236ENST00000522792 CCP110O43303 1012 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 TSPAN1O60635 241 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 INHAP05111 366 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 GNAT1P11488 350 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 GTF2H1P32780 548 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 NKX3-2P78367 333 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 CDK17Q00537 523 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 HSP90AA2PQ14568 343 aaPredicted RBP16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 ASIC2Q16515 512 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 TDRD12Q587J7 1177 aaKnown RBP16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 SRGAP1Q7Z6B7 1085 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 ARHGEF19Q8IW93 802 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 BRSK2Q8IWQ3 736 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 PXYLP1Q8TE99 480 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 GCOM2Q9BZD3 368 aaPredicted RBP16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 PDZD7Q9H5P4 517 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 FBXL5Q9UKA1 691 aa16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 TRIP12Q14669 1992 aaPredicted RBP16.73■□□□□ 0.27
CTNNA1-236ENST00000522792 HOXC8P31273 242 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 EIF4A3P38919 411 aaKnown RBP16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 JAM2P57087 298 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 ARHGAP44Q17R89 818 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 HGSNATQ68CP4 663 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 KLHDC9Q8NEP7 349 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 SYN2Q92777 582 aaPredicted RBP16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 PRIMPOLQ96LW4 560 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 CCDC42Q96M95 316 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 CPSF3Q9UKF6 684 aaKnown RBP16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 PMM2O15305 246 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 CYLC1P35663 651 aaPredicted RBP16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 ENPEPQ07075 957 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 PTPN14Q15678 1187 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 GDF6Q6KF10 455 aaPredicted RBP16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 TMEM192Q8IY95 271 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 FBXL13Q8NEE6 735 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 CGRRF1Q99675 332 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 DEF6Q9H4E7 631 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 UBE2TQ9NPD8 197 aaPredicted RBP16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 GTF2IRD1Q9UHL9 959 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 REXO2Q9Y3B8 237 aaKnown RBP16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 TRIM17Q9Y577 477 aa16.72■□□□□ 0.27
CTNNA1-236ENST00000522792 ABCB7O75027 752 aa16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 TNNT1P13805 278 aa16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 CLDN10P78369 228 aa16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 BIRC3Q13489 604 aa16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 DRAP1Q14919 205 aaPredicted RBP16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 ARHGEF6Q15052 776 aa16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 SLC9C1Q4G0N8 1177 aa16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 TDRD10Q5VZ19 366 aaKnown RBP16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 CCSAPQ6IQ19 270 aaPredicted RBP16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 NYAP1Q6ZVC0 841 aa16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 SLAIN1Q8ND83 568 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms