RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 TIGD5Q53EQ6 642 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 SPECC1Q5M775 1068 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 SPOUT1Q5T280 376 aaKnown RBP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 RINT1Q6NUQ1 792 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 GLB1LQ6UWU2 654 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 KRBA2Q6ZNG9 492 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 LRRC55Q6ZSA7 311 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 C1orf186Q6ZWK4 172 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 USP49Q70CQ1 688 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 TMC6Q7Z403 805 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 GPBP1Q86WP2 473 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 CDR2LQ86X02 465 aaPredicted RBP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 HS6ST3Q8IZP7 471 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 COLGALT1Q8NBJ5 622 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 CNNM3Q8NE01 707 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 SLC39A7Q92504 469 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 SYMPKQ92797 1274 aaKnown RBP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 MRPL38Q96DV4 380 aaKnown RBP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 CALML4Q96GE6 196 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 IFT74Q96LB3 600 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 DRC1Q96MC2 740 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 CLIC6Q96NY7 704 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 PLVAPQ9BX97 442 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 EIF2AQ9BY44 585 aaKnown RBP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 XPO4Q9C0E2 1151 aaKnown RBP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 NXF3Q9H4D5 531 aaKnown RBP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 CWH43Q9H720 699 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 L2HGDHQ9H9P8 463 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 BLOC1S4Q9NUP1 217 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 TYW1Q9NV66 732 aaKnown RBP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 PRMT7Q9NVM4 692 aaPredicted RBP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 IFNKQ9P0W0 207 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 INPP5FQ9Y2H2 1132 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 SRPRBQ9Y5M8 271 aaKnown RBP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 PLXNA4Q9HCM2 1894 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 NPHP3-ACAD11A0A0J9YXS1 232 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 CCDC169A6NNP5 214 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 B4GALT3O60512 393 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 ZNF623O75123 536 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 NPTXRO95502 500 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 ITGB1P05556 798 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 DNAJB1P25685 340 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 ERCC5P28715 1186 aaPredicted RBP7.45□□□□□ -1.22
SPIDR-218ENST00000522222 NPTX2P47972 431 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 PEX3P56589 373 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 UBASH3AP57075 661 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 DMTNQ08495 405 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 TUBB2AQ13885 445 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 MCM6Q14566 821 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 SKIV2LQ15477 1246 aaKnown RBP7.45□□□□□ -1.22
SPIDR-218ENST00000522222 MAPK6Q16659 721 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 PTPROQ16827 1216 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 FAM187BQ17R55 369 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 NOMO2Q5JPE7 1267 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 NT5DC1Q5TFE4 455 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 TAF3Q5VWG9 929 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 AGMOQ6ZNB7 445 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 MRPL10Q7Z7H8 261 aaKnown RBP7.45□□□□□ -1.22
SPIDR-218ENST00000522222 KCTD17Q8N5Z5 321 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 SYT2Q8N9I0 419 aaPredicted RBP7.45□□□□□ -1.22
SPIDR-218ENST00000522222 KLHL23Q8NBE8 558 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 SMG8Q8ND04 991 aaKnown RBP7.45□□□□□ -1.22
SPIDR-218ENST00000522222 ENOX1Q8TC92 643 aaKnown RBP7.45□□□□□ -1.22
SPIDR-218ENST00000522222 RAD54LQ92698 747 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 P2RX5Q93086 422 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 EPSTI1Q96J88 318 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 ZNF558Q96NG5 402 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 REEP2Q9BRK0 252 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 TUBB2BQ9BVA1 445 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 TIPINQ9BVW5 301 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 APOL6Q9BWW8 343 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 NAA15Q9BXJ9 866 aaKnown RBP7.45□□□□□ -1.22
SPIDR-218ENST00000522222 MRPL9Q9BYD2 267 aaKnown RBP7.45□□□□□ -1.22
SPIDR-218ENST00000522222 CCSER1Q9C0I3 900 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 ZMYND15Q9H091 742 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 LMAN2LQ9H0V9 348 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 FZD8Q9H461 694 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 PDZD7Q9H5P4 517 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 RSAD1Q9HA92 442 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 ALG13Q9NP73 1137 aaKnown RBP7.45□□□□□ -1.22
SPIDR-218ENST00000522222 TBC1D13Q9NVG8 400 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 LMCD1Q9NZU5 365 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 ARHGAP28Q9P2N2 729 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 THEGQ9P2T0 379 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 KCNH3Q9ULD8 1083 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 PLAGL2Q9UPG8 496 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 USP20Q9Y2K6 914 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 HES2Q9Y543 173 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 IPPQ9Y573 584 aa7.45□□□□□ -1.22
SPIDR-218ENST00000522222 A0A087X0B3 334 aa7.44□□□□□ -1.22
SPIDR-218ENST00000522222 A0A1B0GUA9 196 aa7.44□□□□□ -1.22
SPIDR-218ENST00000522222 SFI1A8K8P3 1242 aa7.44□□□□□ -1.22
SPIDR-218ENST00000522222 N4BP3O15049 544 aa7.44□□□□□ -1.22
SPIDR-218ENST00000522222 SLC16A4O15374 487 aa7.44□□□□□ -1.22
SPIDR-218ENST00000522222 ATP8B1O43520 1251 aa7.44□□□□□ -1.22
SPIDR-218ENST00000522222 STX10O60499 249 aa7.44□□□□□ -1.22
SPIDR-218ENST00000522222 ZC3H11AO75152 810 aaKnown RBP eCLIP7.44□□□□□ -1.22
SPIDR-218ENST00000522222 FGF18O76093 207 aa7.44□□□□□ -1.22
SPIDR-218ENST00000522222 ITGA4P13612 1032 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms