RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 HERC2P3Q9BVR0 1158 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 SMOC1Q9H4F8 434 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 PLEKHA4Q9H4M7 779 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 AGO4Q9HCK5 861 aaKnown RBP10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 CHST7Q9NS84 486 aa10.07□□□□□ -0.8
TRAPPC9-212ENST00000521944 FOXD2O60548 495 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 ALDH2P05091 517 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 DSG1Q02413 1049 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 RNASELQ05823 741 aaKnown RBP10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 DRP2Q13474 957 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 WDR44Q5JSH3 913 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 SWSAP1Q6NVH7 229 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 EFCAB12Q6NXP0 572 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 PDXDC2PQ6P474 469 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 GLB1LQ6UWU2 654 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 TRMT1LQ7Z2T5 733 aaKnown RBP10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 ARMC2Q8NEN0 867 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 ZCCHC14Q8WYQ9 949 aaKnown RBP10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 CUL5Q93034 780 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 UBAC1Q9BSL1 405 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 SCNM1Q9BWG6 230 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 ARRDC1-AS1Q9H2J1 176 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 PSTPIP2Q9H939 334 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 DACT1Q9NYF0 836 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 NDRG2Q9UN36 371 aaKnown RBP10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 PCDHA6Q9UN73 950 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 AKT3Q9Y243 479 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 FAN1Q9Y2M0 1017 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 PCDHA8Q9Y5H6 950 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 SPTA1P02549 2419 aa10.06□□□□□ -0.8
TRAPPC9-212ENST00000521944 ASCC3Q8N3C0 2202 aaKnown RBP10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 CARNS1A5YM72 827 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 BACH1O14867 736 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 AXIN1O15169 862 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 C1RP00736 705 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 URODP06132 367 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 CHRNB1P11230 501 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 RPL17P18621 184 aaKnown RBP10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 CXCL12P48061 93 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 TMEM259Q4ZIN3 620 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 MTSS1LQ765P7 747 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 NPAS3Q8IXF0 933 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 RSPH1Q8WYR4 309 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 MBOAT7Q96N66 472 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 SDF4Q9BRK5 362 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 TMEM175Q9BSA9 504 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 PHF20Q9BVI0 1012 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 LMAN1LQ9HAT1 526 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 ZNF302Q9NR11 478 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 CHST12Q9NRB3 414 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 FAM105AQ9NUU6 356 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 STK39Q9UEW8 545 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 DPP7Q9UHL4 492 aa10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 MAFBQ9Y5Q3 323 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC9-212ENST00000521944 ZNF462Q96JM2 2506 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 DDX39AO00148 427 aaKnown RBP10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 MEIS1O00470 390 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 WNT7AO00755 349 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 AP1G2O75843 785 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 F12P00748 615 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 CNR2P34972 360 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 RFC5P40937 340 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 RAP1GAPP47736 663 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 GLUD2P49448 558 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 NOVA1P51513 510 aaKnown RBP10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 CCR3P51677 355 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 HEATR6Q6AI08 1181 aaKnown RBP10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 TANGO2Q6ICL3 276 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 LONP2Q86WA8 852 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 GLYCTKQ8IVS8 523 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 COLGALT2Q8IYK4 626 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 GPR62Q9BZJ7 368 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 LY9Q9HBG7 655 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 MRPS17Q9Y2R5 130 aaKnown RBP10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 PRG3Q9Y2Y8 225 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 GPSM3Q9Y4H4 160 aa10.04□□□□□ -0.8
TRAPPC9-212ENST00000521944 MAGEB2O15479 319 aa10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 ECI2O75521 394 aa10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 POMCP01189 267 aa10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 ZNF252P-AS1Q0IIN9 211 aa10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 CEP55Q53EZ4 464 aa10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 FAM160B1Q5W0V3 765 aa10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 TWF2Q6IBS0 349 aaKnown RBP10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 TCEAL6Q6IPX3 200 aa10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 C19orf48Q6RUI8 117 aa10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 MRPL10Q7Z7H8 261 aaKnown RBP10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 ADAM32Q8TC27 787 aa10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 TCEAL3Q969E4 200 aa10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 KRT23Q9C075 422 aa10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 HCFC1R1Q9NWW0 138 aa10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 PCDHB2Q9Y5E7 798 aa10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 MYH9P35579 1960 aaKnown RBP10.03□□□□□ -0.8
TRAPPC9-212ENST00000521944 COL4A2P08572 1712 aa10.02□□□□□ -0.8
TRAPPC9-212ENST00000521944 CCL16O15467 120 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 ZNF862O60290 1169 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 PAPSS2O95340 614 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 FCARP24071 287 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 RBM25P49756 843 aaKnown RBP10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 PDE1AP54750 535 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms