RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 NPHP3-ACAD11A0A0J9YXS1 232 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 PVALEFA0A1B0GWK0 134 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 SFI1A8K8P3 1242 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 TNRC18O15417 2968 aaPredicted RBP9.21□□□□□ -0.94
VPS13B-210ENST00000521932 NBNO60934 754 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 CXCL10P02778 98 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 CTSHP09668 335 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 PLS3P13797 630 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 DARSP14868 501 aaKnown RBP9.21□□□□□ -0.94
VPS13B-210ENST00000521932 MCM4P33991 863 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 NAMPTP43490 491 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 SMTNP53814 917 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 CCL23P55773 120 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 PTENP60484 403 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 RAD51AP2Q09MP3 1159 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 CAPSQ13938 189 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 TFDP1Q14186 410 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 MBTPS1Q14703 1052 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 PPP2R5AQ15172 486 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 PCBP1Q15365 356 aaKnown RBP eCLIP9.21□□□□□ -0.94
VPS13B-210ENST00000521932 DYMQ7RTS9 669 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 SRGAP1Q7Z6B7 1085 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 RNF149Q8NC42 400 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 TMEM40Q8WWA1 233 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 STAMQ92783 540 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 BADQ92934 168 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 SCLYQ96I15 445 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 IFT74Q96LB3 600 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 FDXACB1Q9BRP7 624 aaPredicted RBP9.21□□□□□ -0.94
VPS13B-210ENST00000521932 GCOM2Q9BZD3 368 aaPredicted RBP9.21□□□□□ -0.94
VPS13B-210ENST00000521932 OSBPL7Q9BZF2 842 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 INO80BQ9C086 356 aaPredicted RBP9.21□□□□□ -0.94
VPS13B-210ENST00000521932 POLR3FQ9H1D9 316 aaPredicted RBP9.21□□□□□ -0.94
VPS13B-210ENST00000521932 RUBCNLQ9H714 662 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 POLD4Q9HCU8 107 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 EVPLQ92817 2033 aa9.21□□□□□ -0.94
VPS13B-210ENST00000521932 GPR182O15218 404 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 KRT18P05783 430 aaKnown RBP9.2□□□□□ -0.94
VPS13B-210ENST00000521932 PFKMP08237 780 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 SRGAP2CP0DJJ0 459 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 MAPTP10636 758 aaKnown RBP9.2□□□□□ -0.94
VPS13B-210ENST00000521932 CSF2RAP15509 400 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 SYN1P17600 705 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 SCP2P22307 547 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 AFMP43652 599 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 NPTX2P47972 431 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 EHHADHQ08426 723 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 DMP1Q13316 513 aaPredicted RBP9.2□□□□□ -0.94
VPS13B-210ENST00000521932 CUL4BQ13620 913 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 ELOAQ14241 798 aaKnown RBP9.2□□□□□ -0.94
VPS13B-210ENST00000521932 LPIN1Q14693 890 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 EML3Q32P44 896 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 PLEKHG4Q58EX7 1191 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 ODR4Q5SWX8 454 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 CDCA2Q69YH5 1023 aaPredicted RBP9.2□□□□□ -0.94
VPS13B-210ENST00000521932 TSHZ1Q6ZSZ6 1077 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 RPUSD2Q8IZ73 545 aaKnown RBP9.2□□□□□ -0.94
VPS13B-210ENST00000521932 SPATA20Q8TB22 786 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 BSNDQ8WZ55 320 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 CCDC34Q96HJ3 373 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 NLRP4Q96MN2 994 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 FIZ1Q96SL8 496 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 OSMRQ99650 979 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 FZD8Q9H461 694 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 ST6GALNAC4Q9H4F1 302 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 PARVGQ9HBI0 331 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 OLFML3Q9NRN5 406 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 DACT1Q9NYF0 836 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 ARHGAP28Q9P2N2 729 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 SEL1LQ9UBV2 794 aa9.2□□□□□ -0.94
VPS13B-210ENST00000521932 ZMYND8Q9ULU4 1186 aaPredicted RBP9.2□□□□□ -0.94
VPS13B-210ENST00000521932 H0YCG3 227 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 KLRC4O43908 158 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 TBCAO75347 108 aaKnown RBP9.19□□□□□ -0.94
VPS13B-210ENST00000521932 RPS6KA5O75582 802 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 FAM13AO94988 1023 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 CELA2BP08218 269 aaPredicted RBP9.19□□□□□ -0.94
VPS13B-210ENST00000521932 GAP43P17677 238 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 CASP1P29466 404 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 ABCD1P33897 745 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 PLA2G4AP47712 749 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 EFNA5P52803 228 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 NCKAP1LP55160 1127 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 PEX3P56589 373 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 GTF2BQ00403 316 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 FPGSQ05932 587 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 KCNA1Q09470 495 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 DPYDQ12882 1025 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 PPIGQ13427 754 aaKnown RBP eCLIP9.19□□□□□ -0.941e-6■■■■□ 24.6
VPS13B-210ENST00000521932 POSTNQ15063 836 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 FAM187BQ17R55 369 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 UNC13DQ70J99 1090 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 C16orf59Q7L2K0 433 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 ZNF720Q7Z2F6 126 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 FAM228AQ86W67 206 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 CCDC65Q8IXS2 484 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 GRAMD1CQ8IYS0 662 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 MYCT1Q8N699 235 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 SLC17A8Q8NDX2 589 aa9.19□□□□□ -0.94
VPS13B-210ENST00000521932 TMEM161BQ8NDZ6 487 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms