RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TLK1Q9UKI8 766 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 HPCAL4Q9UM19 191 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 PITPNM2Q9BZ72 1349 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 RHOBTB3O94955 611 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 APOEP02649 317 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 MX2P20592 715 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 MOXD1Q6UVY6 613 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 MRFAP1Q9Y605 127 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 SPAG7O75391 227 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 FKBP1AP62942 108 aaKnown RBP17.18■□□□□ 0.34
USP42-207ENST00000521713 DR1Q01658 176 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 MORC4Q8TE76 937 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 KIF2CQ99661 725 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 POLR3CQ9BUI4 534 aaPredicted RBP17.18■□□□□ 0.34
USP42-207ENST00000521713 ANGPTL3Q9Y5C1 460 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 CTSHP09668 335 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 NNMTP40261 264 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 GYS2P54840 703 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 TAP1Q03518 808 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 EDRF1Q3B7T1 1238 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 NUGGCQ68CJ6 796 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 CYP4F22Q6NT55 531 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 NLRP14Q86W24 1093 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 GPC2Q8N158 579 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 KLC2Q9H0B6 622 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 SENP2Q9HC62 589 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 NFU1Q9UMS0 254 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 ALDH1A1P00352 501 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 CD4P01730 458 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 WDR72Q3MJ13 1102 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 FAM96AQ9H5X1 160 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 C17orf75Q9HAS0 396 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 UBN1Q9NPG3 1134 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 IP6K2Q9UHH9 426 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 ZDHHC9Q9Y397 364 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 CASP7P55210 303 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 ANKRD40Q6AI12 368 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 YIPF3Q9GZM5 350 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 CXorf56Q9H5V9 222 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 BAG5Q9UL15 447 aa17.17■□□□□ 0.34
USP42-207ENST00000521713 CXCL11O14625 94 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 GPC4O75487 556 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 NBPF12Q5TAG4 269 aaPredicted RBP17.16■□□□□ 0.34
USP42-207ENST00000521713 GLB1LQ6UWU2 654 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 METTL16Q86W50 562 aaKnown RBP17.16■□□□□ 0.34
USP42-207ENST00000521713 NUDCD1Q96RS6 583 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 ELAC2Q9BQ52 826 aaKnown RBP17.16■□□□□ 0.34
USP42-207ENST00000521713 SLC24A3Q9HC58 644 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 AGAP1Q9UPQ3 857 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 IL18RAPO95256 599 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 HSPA8P11142 646 aaKnown RBP17.16■□□□□ 0.34
USP42-207ENST00000521713 COG1Q8WTW3 980 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 SPDL1Q96EA4 605 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 STAMBPL1Q96FJ0 436 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 MID2Q9UJV3 735 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 GRID2IPA4D2P6 1211 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 RALAP11233 206 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 PPP2R2AP63151 447 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 TMEM132DQ14C87 1099 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 TMED2Q15363 201 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 ATG16L1Q676U5 607 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 CENPUQ71F23 418 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 ADSSL1Q8N142 457 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 AFG1LQ8WV93 481 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 ARHGAP10A1A4S6 786 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 MEFVO15553 781 aaPredicted RBP17.16■□□□□ 0.34
USP42-207ENST00000521713 DDNO94850 711 aaPredicted RBP17.16■□□□□ 0.34
USP42-207ENST00000521713 FGGP02679 453 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 SLC4A1P02730 911 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 SPARCL1Q14515 664 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 FKBP1CQ5VVH2 108 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 GANCQ8TET4 914 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 DHX38Q92620 1227 aaKnown RBP17.16■□□□□ 0.34
USP42-207ENST00000521713 HDAC11Q96DB2 347 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 PITPNM3Q9BZ71 974 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 IGSF9BQ9UPX0 1349 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 MROH2AA6NES4 1674 aa17.16■□□□□ 0.34
USP42-207ENST00000521713 FOXN1O15353 648 aa17.15■□□□□ 0.34
USP42-207ENST00000521713 BNIP3LO60238 219 aa17.15■□□□□ 0.34
USP42-207ENST00000521713 ADORA2BP29275 332 aa17.15■□□□□ 0.34
USP42-207ENST00000521713 SOX5P35711 763 aa17.15■□□□□ 0.34
USP42-207ENST00000521713 BBS9Q3SYG4 887 aa17.15■□□□□ 0.34
USP42-207ENST00000521713 EFHC2Q5JST6 749 aa17.15■□□□□ 0.34
USP42-207ENST00000521713 ZNF564Q8TBZ8 553 aaPredicted RBP17.15■□□□□ 0.34
USP42-207ENST00000521713 DDTLA6NHG4 134 aaPredicted RBP17.15■□□□□ 0.34
USP42-207ENST00000521713 EIF3DO15371 548 aaKnown RBP eCLIP17.15■□□□□ 0.34
USP42-207ENST00000521713 ZNF189O75820 626 aaPredicted RBP17.15■□□□□ 0.34
USP42-207ENST00000521713 MT-ND3P03897 115 aa17.15■□□□□ 0.34
USP42-207ENST00000521713 DDR1Q08345 913 aa17.15■□□□□ 0.34
USP42-207ENST00000521713 TSTA3Q13630 321 aaPredicted RBP17.15■□□□□ 0.34
USP42-207ENST00000521713 BTBD8Q5XKL5 378 aa17.15■□□□□ 0.34
USP42-207ENST00000521713 EFCAB12Q6NXP0 572 aa17.15■□□□□ 0.34
USP42-207ENST00000521713 ZC3H18Q86VM9 953 aaKnown RBP17.15■□□□□ 0.34
USP42-207ENST00000521713 SYT2Q8N9I0 419 aaPredicted RBP17.15■□□□□ 0.34
USP42-207ENST00000521713 GDAP1Q8TB36 358 aa17.15■□□□□ 0.34
USP42-207ENST00000521713 ZC3H15Q8WU90 426 aaKnown RBP17.15■□□□□ 0.34
USP42-207ENST00000521713 HINFPQ9BQA5 517 aa17.15■□□□□ 0.34
USP42-207ENST00000521713 KLHL8Q9P2G9 620 aaPredicted RBP17.15■□□□□ 0.34
USP42-207ENST00000521713 FTLP02792 175 aaPredicted RBP17.15■□□□□ 0.34
USP42-207ENST00000521713 FDPSP14324 419 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms