RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	TFAP2C	Q92754	450 aa		6.6	□□□□□ -1.35
MSR1-211	ENST00000520846	NDC1	Q9BTX1	674 aa		6.6	□□□□□ -1.35
MSR1-211	ENST00000520846	TMPRSS5	Q9H3S3	457 aa		6.6	□□□□□ -1.35
MSR1-211	ENST00000520846	SORCS3	Q9UPU3	1222 aa		6.6	□□□□□ -1.35
MSR1-211	ENST00000520846	MRFAP1	Q9Y605	127 aa		6.6	□□□□□ -1.35
MSR1-211	ENST00000520846	FAM171A2	A8MVW0	826 aa		6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	XPOT	O43592	962 aa	Known RBP	6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	ZNF202	O95125	648 aa		6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	PEX11B	O96011	259 aa		6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	ALOX15	P16050	662 aa	Predicted RBP	6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	GDF5	P43026	501 aa		6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	SEPT2	Q15019	361 aa		6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	EFCAB12	Q6NXP0	572 aa		6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	SLC35B2	Q8TB61	432 aa		6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	CPT1C	Q8TCG5	803 aa		6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	FUBP3	Q96I24	572 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	GPATCH3	Q96I76	525 aa		6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	SENP6	Q9GZR1	1112 aa	Predicted RBP	6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	KCNH6	Q9H252	994 aa		6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	LANCL2	Q9NS86	450 aa		6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	POGK	Q9P215	609 aa		6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	EIF2B4	Q9UI10	523 aa	Known RBP	6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	HS3ST3A1	Q9Y663	406 aa		6.59	□□□□□ -1.35
MSR1-211	ENST00000520846	ATRNL1	Q5VV63	1379 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	TRIM24	O15164	1050 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	PJA2	O43164	708 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	NARS	O43776	548 aa	Known RBP	6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	PCDHGA12	O60330	932 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	NDUFS2	O75306	463 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	SCAF4	O95104	1147 aa	Known RBP	6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	IL2RB	P14784	551 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	MGAT1	P26572	445 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	GUCY1A2	P33402	732 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	KRT85	P78386	507 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	SP140	Q13342	867 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	CSRP2	Q16527	193 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	FNDC7	Q5VTL7	733 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	IGFL4	Q6B9Z1	124 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	RNF169	Q8NCN4	708 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	OR10H5	Q8NGA6	315 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	OR2I1P	Q8NGU4	316 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	ZFP28	Q8NHY6	868 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	NRG4	Q8WWG1	115 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	STON2	Q8WXE9	905 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	DPF2	Q92785	391 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	CYFIP2	Q96F07	1278 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	FAM193B	Q96PV7	902 aa	Predicted RBP	6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	C7orf25	Q9BPX7	421 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	LDAH	Q9H6V9	325 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	MOCS1	Q9NZB8	636 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	SAP30BP	Q9UHR5	308 aa	Known RBP	6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	INTU	Q9ULD6	942 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	SIK3	Q9Y2K2	1263 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	NOP58	Q9Y2X3	529 aa	Known RBP	6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	REXO2	Q9Y3B8	237 aa	Known RBP	6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	PCDHGA9	Q9Y5G4	932 aa	Known RBP	6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	PCDHGA8	Q9Y5G5	932 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	PCDHGA7	Q9Y5G6	932 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	PCDHGA6	Q9Y5G7	932 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	PCDHGA3	Q9Y5H0	932 aa		6.58	□□□□□ -1.36
MSR1-211	ENST00000520846	CXorf49	A8MYA2	514 aa	Predicted RBP	6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	FZD9	O00144	591 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	WNT10B	O00744	389 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	SNRPA1	P09661	255 aa	Known RBP	6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	C5AR1	P21730	350 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	APOBEC3A	P31941	199 aa	Predicted RBP	6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	ACVRL1	P37023	503 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	WAS	P42768	502 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	SLC6A9	P48067	706 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	CLRN1	P58418	232 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	PCBP2	Q15366	365 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	RRP12	Q5JTH9	1297 aa	Known RBP	6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	AFMID	Q63HM1	303 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	ZNF276	Q8N554	614 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	SLC16A11	Q8NCK7	471 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	ZNF483	Q8TF39	744 aa	Predicted RBP	6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	SLC25A43	Q8WUT9	341 aa	Predicted RBP	6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	KRTAP4-2	Q9BYR5	136 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	SLC2A4RG	Q9NR83	387 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	HOMER2	Q9NSB8	354 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	TMEM140	Q9NV12	185 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	TUBD1	Q9UJT1	453 aa		6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	AJAP1	Q9UKB5	411 aa	Predicted RBP	6.57	□□□□□ -1.36
MSR1-211	ENST00000520846	TNKS	O95271	1327 aa		6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	LEFTY2	O00292	366 aa		6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	SLC16A1	P53985	500 aa		6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	NHLH2	Q02577	135 aa		6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	ABHD18	Q0P651	414 aa		6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	PTPN21	Q16825	1174 aa		6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	PNMA8A	Q86V59	439 aa	Predicted RBP	6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	SYT12	Q8IV01	421 aa		6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	CCHCR1	Q8TD31	782 aa		6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	CASKIN2	Q8WXE0	1202 aa		6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	DCLRE1C	Q96SD1	692 aa	Known RBP	6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	SMAD5	Q99717	465 aa	Known RBP	6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	MRI1	Q9BV20	369 aa		6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	ASPSCR1	Q9BZE9	553 aa		6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	MANSC1	Q9H8J5	431 aa		6.56	□□□□□ -1.36
MSR1-211	ENST00000520846	MMRN2	Q9H8L6	949 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms