RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 GATMP50440 423 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 LRRC63Q05C16 580 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 NFIL3Q16649 462 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 EDRF1Q3B7T1 1238 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 DCAF4L1Q3SXM0 396 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 LRIT3Q3SXY7 679 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 MPZL3Q6UWV2 235 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 APBB1IPQ7Z5R6 666 aaPredicted RBP16.72■□□□□ 0.27
LSM1-203ENST00000520755 ZNF598Q86UK7 904 aaKnown RBP16.72■□□□□ 0.27
LSM1-203ENST00000520755 C12orf56Q8IXR9 622 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 CRIPAKQ8N1N5 446 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 AOPEPQ8N6M6 819 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 SMG8Q8ND04 991 aaKnown RBP16.72■□□□□ 0.27
LSM1-203ENST00000520755 PGBD4Q96DM1 585 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 PBX4Q9BYU1 374 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 CDT1Q9H211 546 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 HSD3B7Q9H2F3 369 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 CBX8Q9HC52 389 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 KIAA1671Q9BY89 1806 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 TRIOBPQ9H2D6 2365 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 LAMA3Q16787 3333 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 NLRC5Q86WI3 1866 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 A0A0B4J269 797 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 MEIS3P2A8K0S8 358 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 CLDN3O15551 220 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 DGKIO75912 1065 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 ITGA4P13612 1032 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 NOLC1Q14978 699 aaKnown RBP eCLIP16.71■□□□□ 0.27
LSM1-203ENST00000520755 PAN2Q504Q3 1202 aaKnown RBP16.71■□□□□ 0.27
LSM1-203ENST00000520755 ZBTB41Q5SVQ8 909 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 HS2ST1Q7LGA3 356 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 MRPL10Q7Z7H8 261 aaKnown RBP16.71■□□□□ 0.27
LSM1-203ENST00000520755 HACE1Q8IYU2 909 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 ABI1Q8IZP0 508 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 ENOX1Q8TC92 643 aaKnown RBP16.71■□□□□ 0.27
LSM1-203ENST00000520755 FAM200AQ8TCP9 573 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 TMEM174Q8WUU8 243 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 RAD9AQ99638 391 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 RNF39Q9H2S5 420 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 DMAC2Q9NW81 257 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 MSRAQ9UJ68 235 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 YBX2Q9Y2T7 364 aaKnown RBP16.71■□□□□ 0.27
LSM1-203ENST00000520755 INSL6Q9Y581 213 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 PCDHA11Q9Y5I1 949 aa16.71■□□□□ 0.27
LSM1-203ENST00000520755 BICDL2A1A5D9 508 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 LCHNA4D1U4 455 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 TBKBP1A7MCY6 615 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 SOX1O00570 391 aaPredicted RBP16.7■□□□□ 0.26
LSM1-203ENST00000520755 HOXA2O43364 376 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 CALUO43852 315 aaPredicted RBP16.7■□□□□ 0.26
LSM1-203ENST00000520755 MCF2P10911 925 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 GARTP22102 1010 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 NR2F2P24468 414 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 AKAP5P24588 427 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 OSTNP61366 133 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 SNRPFP62306 86 aaKnown RBP16.7■□□□□ 0.26
LSM1-203ENST00000520755 HTRA4P83105 476 aaPredicted RBP16.7■□□□□ 0.26
LSM1-203ENST00000520755 SMAD3P84022 425 aaKnown RBP16.7■□□□□ 0.26
LSM1-203ENST00000520755 MYL5Q02045 173 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 MCL1Q07820 350 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 RAB30Q15771 203 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 HABP4Q5JVS0 413 aaKnown RBP16.7■□□□□ 0.26
LSM1-203ENST00000520755 CLLU1OSQ5K130 101 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 ARMCX5Q6P1M9 558 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 AGMOQ6ZNB7 445 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 LUZP1Q86V48 1076 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 SLC9A9Q8IVB4 645 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 CEP120Q8N960 986 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 GOLGA5Q8TBA6 731 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 HELQQ8TDG4 1101 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 EEF2KMTQ96G04 330 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 PCIF1Q9H4Z3 704 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 RNF19AQ9NV58 838 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 SNTG2Q9NY99 539 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 HSPBP1Q9NZL4 362 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 CGNQ9P2M7 1197 aaKnown RBP16.7■□□□□ 0.26
LSM1-203ENST00000520755 PARP2Q9UGN5 583 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 INPP5FQ9Y2H2 1132 aa16.7■□□□□ 0.26
LSM1-203ENST00000520755 IKBKBO14920 756 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 CA3P07451 260 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 DNAJB2P25686 324 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 CASP4P49662 377 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 CYP2J2P51589 502 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 BTG3Q14201 252 aaPredicted RBP16.69■□□□□ 0.26
LSM1-203ENST00000520755 SPATA1Q5VX52 437 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 IRF2BP1Q8IU81 584 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 THNSL1Q8IYQ7 743 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 POMGNT1Q8WZA1 660 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 SAAL1Q96ER3 474 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 TSG101Q99816 390 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 MSTO1Q9BUK6 570 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 NAT10Q9H0A0 1025 aaKnown RBP16.69■□□□□ 0.26
LSM1-203ENST00000520755 RBSNQ9H1K0 784 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 NKX2-4Q9H2Z4 354 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 RSAD1Q9HA92 442 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 RC3H2Q9HBD1 1191 aaKnown RBP16.69■□□□□ 0.26
LSM1-203ENST00000520755 NFE2L3Q9Y4A8 694 aa16.69■□□□□ 0.26
LSM1-203ENST00000520755 GOLGA8IPA6NC78 632 aa16.68■□□□□ 0.26
LSM1-203ENST00000520755 GOLGA8JA6NMD2 632 aa16.68■□□□□ 0.26
LSM1-203ENST00000520755 MEFVO15553 781 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms