RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	AFF4	Q9UHB7	1163 aa	Known RBP	4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	SIK3	Q9Y2K2	1263 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	TMX2	Q9Y320	296 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	PITPNM2	Q9BZ72	1349 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	ISM1	B1AKI9	464 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	C9orf172	C9J069	976 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	FOXN3	O00409	490 aa	Predicted RBP	4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	TBX18	O95935	607 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	EFEMP2	O95967	443 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	MYL4	P12829	197 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	FAH	P16930	419 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	SLC6A9	P48067	706 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	ARL4C	P56559	192 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	CORO7	P57737	925 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	CDC42EP1	Q00587	391 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	CYP27A1	Q02318	531 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	CD276	Q5ZPR3	534 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580		Q6ZVL8	140 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	DCP2	Q8IU60	420 aa	Known RBP	4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	OR8H2	Q8N162	312 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	TNPO1	Q92973	898 aa	Known RBP	4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	CNPPD1	Q9BV87	410 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	BCAS3	Q9H6U6	928 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	LDAH	Q9H6V9	325 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	SLAMF7	Q9NQ25	335 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	TBC1D23	Q9NUY8	699 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	PIH1D1	Q9NWS0	290 aa	Known RBP	4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	NOP53	Q9NZM5	478 aa	Known RBP	4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	STOML1	Q9UBI4	398 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	SCAF8	Q9UPN6	1271 aa	Known RBP	4.24	□□□□□ -1.73
SREK1-208	ENST00000520580		A6NLC8	198 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	MPIG6B	O95866	241 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	GLI4	P10075	376 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	XPA	P23025	273 aa	Predicted RBP	4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	SERPINF1	P36955	418 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	LIFR	P42702	1097 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	WAS	P42768	502 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	SLC6A11	P48066	632 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	HTRA4	P83105	476 aa	Predicted RBP	4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	EXOSC9	Q06265	439 aa	Known RBP	4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	ADGRE1	Q14246	886 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	SLC14A2	Q15849	920 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	PHF19	Q5T6S3	580 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	ABHD15	Q6UXT9	468 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	LRRTM4	Q86VH4	590 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	GLB1L2	Q8IW92	636 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	SLC30A5	Q8TAD4	765 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	LINC01599	Q8WXQ3	324 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	SEC14L1	Q92503	715 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	ZBTB10	Q96DT7	871 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	DDX11	Q96FC9	970 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	HIST1H2AH	Q96KK5	128 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	HIST1H2AJ	Q99878	128 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	PTPN18	Q99952	460 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	PDCD2L	Q9BRP1	358 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	C1orf43	Q9BWL3	253 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	ADAM7	Q9H2U9	754 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	UBN1	Q9NPG3	1134 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	INCENP	Q9NQS7	918 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	CNNM1	Q9NRU3	951 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	MYO1A	Q9UBC5	1043 aa		4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
SREK1-208	ENST00000520580	CNTNAP5	Q8WYK1	1306 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	GOLGA6L3	A6NEY3	463 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	PIP5K1B	O14986	540 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	PRAMEF4	O60810	478 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	TMEM127	O75204	238 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	TIPRL	O75663	272 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	BAIAP3	O94812	1187 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	HDC	P19113	662 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	MAL	P21145	153 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	ELF1	P32519	619 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	PER3	P56645	1201 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	CD69	Q07108	199 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	ADAM9	Q13443	819 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	SNAPC2	Q13487	334 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	FLYWCH1	Q4VC44	716 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	FAM26F	Q5R3K3	315 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	SPOCD1	Q6ZMY3	1216 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	ZGPAT	Q8N5A5	531 aa	Known RBP	4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	SIMC1	Q8NDZ2	872 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	CALML6	Q8TD86	181 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	MAML1	Q92585	1016 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	RRP36	Q96EU6	259 aa	Known RBP	4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	ASIC4	Q96FT7	647 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	SNX22	Q96L94	193 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	MRGPRX4	Q96LA9	322 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	BRD9	Q9H8M2	597 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	RIC8A	Q9NPQ8	531 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	SRRD	Q9UH36	339 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	HCFC2	Q9Y5Z7	792 aa		4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.23	□□□□□ -1.73
SREK1-208	ENST00000520580	ZC3H12D	A2A288	527 aa	Known RBP	4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	HMX3	A6NHT5	357 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	GYS1	P13807	737 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	JUP	P14923	745 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	GMPR	P36959	345 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	FLT3LG	P49771	235 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms