RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 IER2Q9BTL4 223 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 SUGCTQ9HAC7 445 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 ZNF302Q9NR11 478 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 DLGAP2Q9P1A6 1054 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 EGFL7Q9UHF1 273 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 DERAQ9Y315 318 aa3.16□□□□□ -1.9
MCF2-208ENST00000519895 WDFY4Q6ZS81 3184 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 FAM86B1E9PN63 330 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 NRG2O14511 850 aaPredicted RBP3.15□□□□□ -1.9
MCF2-208ENST00000519895 SLC28A2O43868 658 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 LZTS3O60299 673 aaPredicted RBP3.15□□□□□ -1.9
MCF2-208ENST00000519895 NEMFO60524 1076 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 ARIH2O95376 493 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 C22orf31O95567 290 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 FAM86B2P0C5J1 330 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 TMOD1P28289 359 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 HOXA13P31271 388 aaPredicted RBP3.15□□□□□ -1.9
MCF2-208ENST00000519895 CYP2C19P33261 490 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 ARL2P36404 184 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 ADCYAP1R1P41586 468 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 STAT5BP51692 787 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 PSMD2Q13200 908 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 ITGB3BPQ13352 177 aaPredicted RBP3.15□□□□□ -1.9
MCF2-208ENST00000519895 ADAM15Q13444 863 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 TFDP1Q14186 410 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 PTPAQ15257 358 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 TSHZ1Q6ZSZ6 1077 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 CXXC5Q7LFL8 322 aaKnown RBP3.15□□□□□ -1.9
MCF2-208ENST00000519895 MICAL1Q8TDZ2 1067 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 P2RX5Q93086 422 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 TMEM175Q9BSA9 504 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 SCAND2PQ9GZW5 306 aaPredicted RBP3.15□□□□□ -1.9
MCF2-208ENST00000519895 MLXIPQ9HAP2 919 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 STYXL1Q9Y6J8 313 aa3.15□□□□□ -1.9
MCF2-208ENST00000519895 PVALEFA0A1B0GWK0 134 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 C2orf72A6NCS6 295 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 UPK3BL1B0FP48 263 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 UPK3BL2E5RIL1 263 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 H3BRB1 525 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 TMEM189-UBE2V1I3L0A0 370 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 GPR182O15218 404 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 PMM2O15305 246 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 GAS7O60861 476 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 PGK2P07205 417 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 SMIM10L2AP0DMW4 78 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 SMIM10L2BP0DMW5 78 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 CDC25AP30304 524 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 MRPS6P82932 125 aaKnown RBP3.15□□□□□ -1.91
MCF2-208ENST00000519895 CREMQ03060 361 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 GIT2Q14161 759 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 CALCRLQ16602 461 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 TSNAXIP1Q2TAA8 658 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 XKR4Q5GH76 650 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 LRCH2Q5VUJ6 765 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 PDXDC1Q6P996 788 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 MTHFD1LQ6UB35 978 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 HERC6Q8IVU3 1022 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 FBXO16Q8IX29 292 aaPredicted RBP3.15□□□□□ -1.91
MCF2-208ENST00000519895 TMC2Q8TDI7 906 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 ATRIPQ8WXE1 791 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 CCDC34Q96HJ3 373 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 CTAGE1Q96RT6 745 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 STRA6Q9BX79 667 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 TUT1Q9H6E5 874 aaKnown RBP3.15□□□□□ -1.91
MCF2-208ENST00000519895 RC3H2Q9HBD1 1191 aaKnown RBP3.15□□□□□ -1.91
MCF2-208ENST00000519895 ERVK-5Q9HDB9 667 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 DISC1Q9NRI5 854 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 ZHX1Q9UKY1 873 aaPredicted RBP3.15□□□□□ -1.91
MCF2-208ENST00000519895 MTMR6Q9Y217 621 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 KIAA1671Q9BY89 1806 aa3.15□□□□□ -1.91
MCF2-208ENST00000519895 DENND4AQ7Z401 1863 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 ZBTB42B2RXF5 422 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 EIF3DO15371 548 aaKnown RBP eCLIP3.14□□□□□ -1.91
MCF2-208ENST00000519895 STX6O43752 255 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 EFEMP2O95967 443 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 IQCF3P0C7M6 154 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 STAG3L1P0CL83 205 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 ZSCAN22P10073 491 aaPredicted RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 CSF2RAP15509 400 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 TAL1P17542 331 aaPredicted RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 CYP11B2P19099 503 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 CYP3A5P20815 502 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 CNR2P34972 360 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 NAMPTP43490 491 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 DNM2P50570 870 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 POLGP54098 1239 aaPredicted RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 HNRNPDQ14103 355 aaKnown RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 GRIK4Q16099 956 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 BMT2Q1RMZ1 405 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 USH1GQ495M9 461 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 MARCH8Q5T0T0 291 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 CCDC181Q5TID7 509 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 SPNS3Q6ZMD2 512 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 CCDC73Q6ZRK6 1079 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 MIER3Q7Z3K6 550 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 FMNL3Q8IVF7 1028 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 SYT2Q8N9I0 419 aaPredicted RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 IL31RAQ8NI17 732 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 EPS8L1Q8TE68 723 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 GDPD5Q8WTR4 605 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms