RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 BCAR3O75815 825 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 KCNJ4P48050 445 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 PREPP48147 710 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 MANFP55145 182 aaKnown RBP8.2□□□□□ -1.1
CLK4-202ENST00000519132 EIF4A1P60842 406 aaKnown RBP8.2□□□□□ -1.1
CLK4-202ENST00000519132 PSMC1P62191 440 aaKnown RBP8.2□□□□□ -1.1
CLK4-202ENST00000519132 GRM1Q13255 1194 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 POSTNQ15063 836 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 GCC1Q96CN9 775 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 ZFYVE21Q9BQ24 234 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 TELO2Q9Y4R8 837 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 LRRFIP2Q9Y608 721 aaKnown RBP8.2□□□□□ -1.1
CLK4-202ENST00000519132 C7orf72A4D263 438 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 NEFHP12036 1026 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 TSHRP16473 764 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 ZNF174Q15697 407 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.2□□□□□ -1.1
CLK4-202ENST00000519132 ANO6Q4KMQ2 910 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 LIN54Q6MZP7 749 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 SHISA2Q6UWI4 295 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 LYSMD2Q8IV50 215 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 PIP4K2CQ8TBX8 421 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 SSH1Q8WYL5 1049 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 MIS18AQ9NYP9 233 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 PLA2G2EQ9NZK7 142 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 PCDHA13Q9Y5I0 950 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 SBF2Q86WG5 1849 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 KCPQ6ZWJ8 1503 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 HTRA2O43464 458 aaPredicted RBP8.2□□□□□ -1.1
CLK4-202ENST00000519132 PPP1R11O60927 126 aaPredicted RBP8.2□□□□□ -1.1
CLK4-202ENST00000519132 TIAF1O95411 115 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 CELA3BP08861 270 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 EPXP11678 715 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 SKILP12757 684 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 ZNF790Q6PG37 636 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 RSPO2Q6UXX9 243 aaPredicted RBP8.2□□□□□ -1.1
CLK4-202ENST00000519132 SH2D3CQ8N5H7 860 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 TOP6BLQ8N6T0 577 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 OR2I1PQ8NGU4 316 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 ARHGAP45Q92619 1136 aa8.2□□□□□ -1.1
CLK4-202ENST00000519132 NHSQ6T4R5 1651 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 KITP10721 976 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 NID1P14543 1247 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 RBM5P52756 815 aaKnown RBP eCLIP8.19□□□□□ -1.1
CLK4-202ENST00000519132 PDXDC1Q6P996 788 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 DRC7Q8IY82 874 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 MNS1Q8NEH6 495 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 RSPH1Q8WYR4 309 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 TCTN2Q96GX1 697 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 ASPNQ9BXN1 380 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 PRSS38A1L453 326 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 IPO5O00410 1097 aaKnown RBP8.19□□□□□ -1.1
CLK4-202ENST00000519132 HRGP04196 525 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 GNAT1P11488 350 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 HARSP12081 509 aaKnown RBP8.19□□□□□ -1.1
CLK4-202ENST00000519132 RXRGP48443 463 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 CATSPEREQ5SY80 951 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 CEP68Q76N32 757 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 PLD6Q8N2A8 252 aaKnown RBP8.19□□□□□ -1.1
CLK4-202ENST00000519132 SPATA5Q8NB90 893 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 C1GALT1C1Q96EU7 318 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 CXorf56Q9H5V9 222 aa8.19□□□□□ -1.1
CLK4-202ENST00000519132 GMPR2Q9P2T1 348 aaKnown RBP8.19□□□□□ -1.1
CLK4-202ENST00000519132 VAV1P15498 845 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 LGALS4P56470 323 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 MPP1Q00013 466 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 IFT88Q13099 833 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 MOGSQ13724 837 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 KRT24Q2M2I5 525 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 PKDCCQ504Y2 493 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 LRCH2Q5VUJ6 765 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 CCDC30Q5VVM6 783 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 PDZD4Q76G19 769 aaPredicted RBP8.18□□□□□ -1.1
CLK4-202ENST00000519132 SUN2Q9UH99 717 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 ASAP1Q9ULH1 1129 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 TMX2Q9Y320 296 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 BRWD3Q6RI45 1802 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 TULP2O00295 520 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 ALAS2P22557 587 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 MAP2K6P52564 334 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 RAB1AP62820 205 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 NUCB1Q02818 461 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 FAPQ12884 760 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 CDADC1Q9BWV3 514 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 FOXP3Q9BZS1 431 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 RSPH9Q9H1X1 276 aaPredicted RBP8.18□□□□□ -1.1
CLK4-202ENST00000519132 MED4Q9NPJ6 270 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 ERICH4A6NGS2 130 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 CAPN8A6NHC0 703 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 WTIPA6NIX2 430 aaPredicted RBP8.18□□□□□ -1.1
CLK4-202ENST00000519132 AQP12BA6NM10 295 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 TMEM127O75204 238 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 CASQ1P31415 396 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 AGFG1P52594 562 aaKnown RBP8.18□□□□□ -1.1
CLK4-202ENST00000519132 TNK2Q07912 1038 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 DAAM2Q86T65 1068 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 LSM14AQ8ND56 463 aaKnown RBP8.18□□□□□ -1.1
CLK4-202ENST00000519132 KCTD10Q9H3F6 313 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 MARCH2Q9P0N8 246 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 CPNE7Q9UBL6 633 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms