RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 CSRP2Q16527 193 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 METTL24Q5JXM2 366 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 GJC2Q5T442 439 aaPredicted RBP5.02□□□□□ -1.61
SKP1-205ENST00000519054 ZNF572Q7Z3I7 529 aaPredicted RBP5.02□□□□□ -1.61
SKP1-205ENST00000519054 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.02□□□□□ -1.61
SKP1-205ENST00000519054 OR10H5Q8NGA6 315 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 OR2I1PQ8NGU4 316 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 SLC35B2Q8TB61 432 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 CPT1CQ8TCG5 803 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 NRG4Q8WWG1 115 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 TFAP2CQ92754 450 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 DPF2Q92785 391 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 FUBP3Q96I24 572 aaKnown RBP eCLIP5.02□□□□□ -1.61
SKP1-205ENST00000519054 SENP6Q9GZR1 1112 aaPredicted RBP5.02□□□□□ -1.61
SKP1-205ENST00000519054 SCAND2PQ9GZW5 306 aaPredicted RBP5.02□□□□□ -1.61
SKP1-205ENST00000519054 KCNH6Q9H252 994 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 SLC2A4RGQ9NR83 387 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 LANCL2Q9NS86 450 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 POGKQ9P215 609 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 REXO2Q9Y3B8 237 aaKnown RBP5.02□□□□□ -1.61
SKP1-205ENST00000519054 PCDHGA9Q9Y5G4 932 aaKnown RBP5.02□□□□□ -1.61
SKP1-205ENST00000519054 PCDHGA8Q9Y5G5 932 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 PCDHGA7Q9Y5G6 932 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 PCDHGA6Q9Y5G7 932 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 PCDHGA3Q9Y5H0 932 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 SHTN1A0MZ66 631 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 KLHL33A6NCF5 533 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 GRXCR1A8MXD5 290 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 FZD9O00144 591 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 NDUFS2O75306 463 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 ENDOD1O94919 500 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 SCAF4O95104 1147 aaKnown RBP5.01□□□□□ -1.61
SKP1-205ENST00000519054 RBP3P10745 1247 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 ALOX15P16050 662 aaPredicted RBP5.01□□□□□ -1.61
SKP1-205ENST00000519054 C5AR1P21730 350 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 IBSPP21815 317 aaPredicted RBP5.01□□□□□ -1.61
SKP1-205ENST00000519054 APOBEC3AP31941 199 aaPredicted RBP5.01□□□□□ -1.61
SKP1-205ENST00000519054 GDF5P43026 501 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 SLC6A9P48067 706 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 PTPN21Q16825 1174 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 BMT2Q1RMZ1 405 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 FAM47AQ5JRC9 791 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 FNDC7Q5VTL7 733 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 AFMIDQ63HM1 303 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 EFCAB12Q6NXP0 572 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 SYT12Q8IV01 421 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 SLC16A11Q8NCK7 471 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.01□□□□□ -1.61
SKP1-205ENST00000519054 CCHCR1Q8TD31 782 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 SSH1Q8WYL5 1049 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 FAM193BQ96PV7 902 aaPredicted RBP5.01□□□□□ -1.61
SKP1-205ENST00000519054 NDC1Q9BTX1 674 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 TUBD1Q9UJT1 453 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 AJAP1Q9UKB5 411 aaPredicted RBP5.01□□□□□ -1.61
SKP1-205ENST00000519054 INTUQ9ULD6 942 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 CLCA2Q9UQC9 943 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 SIK3Q9Y2K2 1263 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 ATRNL1Q5VV63 1379 aa5.01□□□□□ -1.61
SKP1-205ENST00000519054 FAM171A2A8MVW0 826 aa5□□□□□ -1.61
SKP1-205ENST00000519054 CXorf49A8MYA2 514 aaPredicted RBP5□□□□□ -1.61
SKP1-205ENST00000519054 LEFTY2O00292 366 aa5□□□□□ -1.61
SKP1-205ENST00000519054 NARSO43776 548 aaKnown RBP5□□□□□ -1.61
SKP1-205ENST00000519054 RECQL4O94761 1208 aa5□□□□□ -1.61
SKP1-205ENST00000519054 RAP2AP10114 183 aa5□□□□□ -1.61
SKP1-205ENST00000519054 FPR1P21462 350 aa5□□□□□ -1.61
SKP1-205ENST00000519054 RAP2BP61225 183 aa5□□□□□ -1.61
SKP1-205ENST00000519054 NHLH2Q02577 135 aa5□□□□□ -1.61
SKP1-205ENST00000519054 SP140Q13342 867 aa5□□□□□ -1.61
SKP1-205ENST00000519054 USP51Q70EK9 711 aa5□□□□□ -1.61
SKP1-205ENST00000519054 PNMA8AQ86V59 439 aaPredicted RBP5□□□□□ -1.61
SKP1-205ENST00000519054 ZNF276Q8N554 614 aa5□□□□□ -1.61
SKP1-205ENST00000519054 ZNF483Q8TF39 744 aaPredicted RBP5□□□□□ -1.61
SKP1-205ENST00000519054 PHACTR3Q96KR7 559 aa5□□□□□ -1.61
SKP1-205ENST00000519054 ASPSCR1Q9BZE9 553 aa5□□□□□ -1.61
SKP1-205ENST00000519054 MMRN2Q9H8L6 949 aa5□□□□□ -1.61
SKP1-205ENST00000519054 HOMER2Q9NSB8 354 aa5□□□□□ -1.61
SKP1-205ENST00000519054 MRFAP1Q9Y605 127 aa5□□□□□ -1.61
SKP1-205ENST00000519054 TNKSO95271 1327 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 LOC105371045A0A1W2PR82 267 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 TRIM24O15164 1050 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 PJA2O43164 708 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 AKAP8O43823 692 aaKnown RBP4.99□□□□□ -1.61
SKP1-205ENST00000519054 IL2RBP14784 551 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 MGAT1P26572 445 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 PCSK1P29120 753 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 GUCY1A2P33402 732 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 ACVRL1P37023 503 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 ALDH1A3P47895 512 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 CLRN1P58418 232 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 RNASE9P60153 205 aaKnown RBP4.99□□□□□ -1.61
SKP1-205ENST00000519054 BRDTQ58F21 947 aaPredicted RBP4.99□□□□□ -1.61
SKP1-205ENST00000519054 RRP12Q5JTH9 1297 aaKnown RBP4.99□□□□□ -1.61
SKP1-205ENST00000519054 ATXN7L2Q5T6C5 722 aaPredicted RBP4.99□□□□□ -1.61
SKP1-205ENST00000519054 DRICH1Q6PGQ1 229 aaPredicted RBP4.99□□□□□ -1.61
SKP1-205ENST00000519054 ZFPM1Q8IX07 1006 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 RHOT1Q8IXI2 618 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 ZFP28Q8NHY6 868 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 SLC25A43Q8WUT9 341 aaPredicted RBP4.99□□□□□ -1.61
SKP1-205ENST00000519054 RAB24Q969Q5 203 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 CLIP3Q96DZ5 547 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms