RNA–Protein interactions for RNA: ENST00000518847.1

TRAPPC2-206, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-206ENST00000518847 SNRNP35Q16560 246 aaKnown RBP12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 DPCR1Q3MIW9 517 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 TMEM240Q5SV17 173 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 SPATA1Q5VX52 437 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 ZNF365Q70YC5 407 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 FRMD5Q7Z6J6 570 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 SMYD4Q8IYR2 804 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 FBXL18Q96ME1 805 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 CDT1Q9H211 546 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 TSPY26PQ9H489 355 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 THAP9Q9H5L6 903 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 RSAD1Q9HA92 442 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 RBAKQ9NYW8 714 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 CTNND2Q9UQB3 1225 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 IPPQ9Y573 584 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 INSL6Q9Y581 213 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 LTBP2Q14767 1821 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 CEP290O15078 2479 aa12.89□□□□□ -0.35
TRAPPC2-206ENST00000518847 ARHGEF37A1IGU5 675 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 BMP6P22004 513 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 WDR5P61964 334 aaKnown RBP12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 KCNA1Q09470 495 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 GPNMBQ14956 572 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 ANO6Q4KMQ2 910 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 ZCWPW2Q504Y3 356 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 OTOP2Q7RTS6 562 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 ZBTB33Q86T24 672 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 THNSL1Q8IYQ7 743 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 RNPC3Q96LT9 517 aaKnown RBP12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 UROC1Q96N76 676 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 FAM193BQ96PV7 902 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 FAM213AQ9BRX8 229 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 ZBED2Q9BTP6 218 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 TMEM117Q9H0C3 514 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 AAASQ9NRG9 546 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 DMAC2Q9NW81 257 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 PARP2Q9UGN5 583 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 ARMCX3Q9UH62 379 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 CPSF3Q9UKF6 684 aaKnown RBP12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 C2CD2Q9Y426 696 aa12.88□□□□□ -0.35
TRAPPC2-206ENST00000518847 INPPL1O15357 1258 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 N4BP1O75113 896 aaKnown RBP12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 TPM3P06753 285 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 THP07101 528 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 HARSP12081 509 aaKnown RBP12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 ATP2A2P16615 1042 aaKnown RBP12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 CYP3A5P20815 502 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 EEF1GP26641 437 aaKnown RBP12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 ADSSP30520 456 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 GTF2H1P32780 548 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 HOXD13P35453 343 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 CYP2J2P51589 502 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 CCDC40Q4G0X9 1142 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 UBXN11Q5T124 520 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 CEP135Q66GS9 1140 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 ANKRD40Q6AI12 368 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 BRSK2Q8IWQ3 736 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 ZC3H3Q8IXZ2 948 aaKnown RBP12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 FAM186BQ8IYM0 893 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 LRRC43Q8N309 656 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 FAM200AQ8TCP9 573 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 TMC2Q8TDI7 906 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 DDX27Q96GQ7 796 aaKnown RBP12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 YME1L1Q96TA2 773 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 RAD9AQ99638 391 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 GDF15Q99988 308 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 CBWD1Q9BRT8 395 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 FGFBP2Q9BYJ0 223 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 SEMA6BQ9H3T3 888 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 TTC3P53804 2025 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 MICAL3Q7RTP6 2002 aa12.87□□□□□ -0.35
TRAPPC2-206ENST00000518847 ANKRD63C9JTQ0 380 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 H0YGN5 161 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 ABLIM1O14639 778 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 CLIC2O15247 247 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 TNNC2P02585 160 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 ADRB2P07550 413 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 ACRP10323 421 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 KCNE1P15382 129 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 ATF7P17544 494 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 CDK11BP21127 795 aaKnown RBP12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 MARSP56192 900 aaKnown RBP12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 RNASELQ05823 741 aaKnown RBP12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 GRIK3Q13003 919 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 PSMD6Q15008 389 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 RAB30Q15771 203 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 DUOXA2Q1HG44 320 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 NOMO2Q5JPE7 1267 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 SMYD5Q6GMV2 418 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 SLC39A4Q6P5W5 647 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 ZNF598Q86UK7 904 aaKnown RBP12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 WDR49Q8IV35 697 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 CMTR2Q8IYT2 770 aaKnown RBP12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 RNF169Q8NCN4 708 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 CCDC150Q8NCX0 1101 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 GLIS3Q8NEA6 775 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 BEST2Q8NFU1 509 aa12.86□□□□□ -0.35
TRAPPC2-206ENST00000518847 ANKRD36BP1Q96IX9 119 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms