RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 MATR3P43243 847 aaKnown RBP eCLIP11.63□□□□□ -0.55
SPIDR-205ENST00000518060 NPTX2P47972 431 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 YARSP54577 528 aaKnown RBP11.63□□□□□ -0.55
SPIDR-205ENST00000518060 CACNB1Q02641 598 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-205ENST00000518060 STRN3Q13033 797 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 HSP90AA2PQ14568 343 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-205ENST00000518060 HERC4Q5GLZ8 1057 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-205ENST00000518060 GLRA4Q5JXX5 417 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 ATAT1Q5SQI0 421 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 NT5DC1Q5TFE4 455 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 RINT1Q6NUQ1 792 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 FUT10Q6P4F1 479 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 ELMSAN1Q6PJG2 1045 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 BRAPQ7Z569 592 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 GLYCTKQ8IVS8 523 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 SLC22A17Q8WUG5 538 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 RIN2Q8WYP3 895 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-205ENST00000518060 CALML4Q96GE6 196 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 PNMA5Q96PV4 448 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 MRPL4Q9BYD3 311 aaKnown RBP11.63□□□□□ -0.55
SPIDR-205ENST00000518060 POMKQ9H5K3 350 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 SFXN1Q9H9B4 322 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 ANKFY1Q9P2R3 1169 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 ADAM28Q9UKQ2 775 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 NR2E1Q9Y466 385 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 ZMYM2Q9UBW7 1377 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 SF3B1O75533 1304 aaKnown RBP eCLIP11.62□□□□□ -0.553e-6■■■■■ 137.9
SPIDR-205ENST00000518060 TEX28O15482 410 aa11.62□□□□□ -0.55
SPIDR-205ENST00000518060 KIF4AO95239 1232 aa11.62□□□□□ -0.55
SPIDR-205ENST00000518060 BMP15O95972 392 aa11.62□□□□□ -0.55
SPIDR-205ENST00000518060 KRT18P05783 430 aaKnown RBP11.62□□□□□ -0.55
SPIDR-205ENST00000518060 THP07101 528 aa11.62□□□□□ -0.55
SPIDR-205ENST00000518060 CLCN4P51793 760 aa11.62□□□□□ -0.55
SPIDR-205ENST00000518060 ARL6IP4Q66PJ3 421 aaKnown RBP11.62□□□□□ -0.55
SPIDR-205ENST00000518060 CEP57Q86XR8 500 aa11.62□□□□□ -0.55
SPIDR-205ENST00000518060 DAW1Q8N136 415 aa11.62□□□□□ -0.55
SPIDR-205ENST00000518060 TDRD5Q8NAT2 981 aaKnown RBP11.62□□□□□ -0.55
SPIDR-205ENST00000518060 GSTCDQ8NEC7 633 aa11.62□□□□□ -0.55
SPIDR-205ENST00000518060 BICD1Q96G01 975 aa11.62□□□□□ -0.55
SPIDR-205ENST00000518060 TIPINQ9BVW5 301 aa11.62□□□□□ -0.55
SPIDR-205ENST00000518060 CCDC94Q9BW85 323 aaPredicted RBP11.62□□□□□ -0.55
SPIDR-205ENST00000518060 TARS2Q9BW92 718 aaKnown RBP11.62□□□□□ -0.55
SPIDR-205ENST00000518060 GPR62Q9BZJ7 368 aa11.62□□□□□ -0.55
SPIDR-205ENST00000518060 ZHX3Q9H4I2 956 aa11.62□□□□□ -0.55
SPIDR-205ENST00000518060 MAN1C1Q9NR34 630 aa11.62□□□□□ -0.55
SPIDR-205ENST00000518060 NPHP3-ACAD11A0A0J9YXS1 232 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 C2CD4DB7Z1M9 353 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 PTGESO14684 152 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 SPATA31D3P0C874 917 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 PLS3P13797 630 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 RPL17P18621 184 aaKnown RBP11.61□□□□□ -0.55
SPIDR-205ENST00000518060 GUCY2CP25092 1073 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 SMTNP53814 917 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 SF3A1Q15459 793 aaKnown RBP11.61□□□□□ -0.55
SPIDR-205ENST00000518060 USP41Q3LFD5 358 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 SPATA31D4Q6ZUB0 917 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 C1orf186Q6ZWK4 172 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 GPBP1Q86WP2 473 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 PALB2Q86YC2 1186 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 PAAF1Q9BRP4 392 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 CDT1Q9H211 546 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 CXCL16Q9H2A7 254 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 TOPORSQ9NS56 1045 aaPredicted RBP11.61□□□□□ -0.55
SPIDR-205ENST00000518060 TNFSF13BQ9Y275 285 aa11.61□□□□□ -0.55
SPIDR-205ENST00000518060 RBM19Q9Y4C8 960 aaKnown RBP11.61□□□□□ -0.55
SPIDR-205ENST00000518060 TMEM221A6NGB7 291 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 M0R296 226 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 TBCAO75347 108 aaKnown RBP11.6□□□□□ -0.55
SPIDR-205ENST00000518060 FAM13AO94988 1023 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 PLCG1P19174 1290 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 SLC12A3P55017 1021 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 ZXDAP98168 799 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 DSG1Q02413 1049 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 CREMQ03060 361 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 CEBPZQ03701 1054 aaKnown RBP11.6□□□□□ -0.55
SPIDR-205ENST00000518060 MAPK7Q13164 816 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 CUL4AQ13619 759 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 KARSQ15046 597 aaKnown RBP11.6□□□□□ -0.55
SPIDR-205ENST00000518060 PTPN21Q16825 1174 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 TMEM119Q4V9L6 283 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 HYIQ5T013 277 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 FAM171A1Q5VUB5 890 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 KIAA0319Q5VV43 1072 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 PRSS55Q6UWB4 352 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-205ENST00000518060 CCDC149Q6ZUS6 474 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 CEP120Q8N960 986 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 SYT2Q8N9I0 419 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-205ENST00000518060 EDAQ92838 391 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 FAM122AQ96E09 287 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 AK8Q96MA6 479 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 ACO2Q99798 780 aaKnown RBP11.6□□□□□ -0.55
SPIDR-205ENST00000518060 TTPALQ9BTX7 342 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 BACH2Q9BYV9 841 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 TMEM134Q9H6X4 195 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 C17orf75Q9HAS0 396 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 PIDD1Q9HB75 910 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.6□□□□□ -0.55
SPIDR-205ENST00000518060 ARHGAP28Q9P2N2 729 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 DPP7Q9UHL4 492 aa11.6□□□□□ -0.55
SPIDR-205ENST00000518060 C5orf42Q9H799 3197 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms