RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 A0A1W2PQJ5 194 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 ARHGEF35A5YM69 484 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 USP27XA6NNY8 438 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 B4DLN1 442 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 PDXKO00764 312 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 DYNC1I1O14576 645 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 CXCL11O14625 94 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 EIF3DO15371 548 aaKnown RBP eCLIP6.43□□□□□ -1.38
CD47-205ENST00000517766 CHMP2AO43633 222 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 LYPLA2O95372 231 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 GHRHP01286 108 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 UQCRHP07919 91 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 CCDC175P0C221 793 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 MYCLP12524 364 aaPredicted RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 GUCY2CP25092 1073 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 RPL13P26373 211 aaKnown RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 GSTT1P30711 240 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 GTF2F1P35269 517 aaKnown RBP eCLIP6.43□□□□□ -1.38
CD47-205ENST00000517766 KRT9P35527 623 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 COPB2P35606 906 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 QARSP47897 775 aaKnown RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 ZNF157P51786 506 aaPredicted RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 NRLP54845 237 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 PSMC6P62333 389 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 GPLD1P80108 840 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 MRPS9P82933 396 aaKnown RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 ZBED6P86452 979 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 PPP2R3AQ06190 1150 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 BAATQ14032 418 aaPredicted RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 TMEM132BQ14DG7 1078 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 LRRC41Q15345 812 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 NFIL3Q16649 462 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 PTPN21Q16825 1174 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 KNOP1Q1ED39 458 aaKnown RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 CCDC40Q4G0X9 1142 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 ZCWPW2Q504Y3 356 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 MIIPQ5JXC2 388 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 PRAMEF18Q5VWM3 479 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 ADAMTSL4Q6UY14 1074 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 CYP26C1Q6V0L0 522 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 NSMFQ6X4W1 530 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 LRRC55Q6ZSA7 311 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 C1orf186Q6ZWK4 172 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 EPM2AIP1Q7L775 607 aaPredicted RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 VSIG10LQ86VR7 867 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 SFR1Q86XK3 245 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 ZC3H3Q8IXZ2 948 aaKnown RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 ANKRD13AQ8IZ07 590 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 ZNF397Q8NF99 534 aaPredicted RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 DNERQ8NFT8 737 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 OR8K1Q8NGG5 319 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 NSUN6Q8TEA1 469 aaKnown RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 SCFD1Q8WVM8 642 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 UIMC1Q96RL1 719 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 IWS1Q96ST2 819 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 SENP7Q9BQF6 1050 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 TRIM56Q9BRZ2 755 aaKnown RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 KCTD10Q9H3F6 313 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 ACBD3Q9H3P7 528 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 NDST4Q9H3R1 872 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 PARVGQ9HBI0 331 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 METTL14Q9HCE5 456 aaKnown RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 HOMER2Q9NSB8 354 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 ABHD10Q9NUJ1 306 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 TYW1Q9NV66 732 aaKnown RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 ZNHIT6Q9NWK9 470 aaKnown RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 RGL1Q9NZL6 768 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 FBXO40Q9UH90 709 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 GGT7Q9UJ14 662 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 DBR1Q9UK59 544 aaKnown RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 ZNF214Q9UL59 606 aaPredicted RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 PPP2R2CQ9Y2T4 447 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 LUC7L2Q9Y383 392 aaKnown RBP6.43□□□□□ -1.38
CD47-205ENST00000517766 SNCAIPQ9Y6H5 919 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 PHLPP2Q6ZVD8 1323 aa6.43□□□□□ -1.38
CD47-205ENST00000517766 NPHP3-ACAD11A0A0J9YXS1 232 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 IQCA1LA6NCM1 817 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 WDR64B1ANS9 1081 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 DDX39AO00148 427 aaKnown RBP6.42□□□□□ -1.38
CD47-205ENST00000517766 DHX15O43143 795 aaKnown RBP6.42□□□□□ -1.38
CD47-205ENST00000517766 GCNT3O95395 438 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 TRIM21P19474 475 aaKnown RBP6.42□□□□□ -1.38
CD47-205ENST00000517766 CYLC1P35663 651 aaPredicted RBP6.42□□□□□ -1.38
CD47-205ENST00000517766 FXR1P51114 621 aaKnown RBP eCLIP6.42□□□□□ -1.38
CD47-205ENST00000517766 ZNF131P52739 623 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 PSMC5P62195 406 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 ETF1P62495 437 aaKnown RBP6.42□□□□□ -1.38
CD47-205ENST00000517766 CDK17Q00537 523 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 GOLGA8FQ08AF8 430 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 GOLGA8DPQ0D2H9 430 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 ADAM9Q13443 819 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 ALCAMQ13740 583 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 PRKG1Q13976 671 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 VGLL4Q14135 290 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 MYBPC2Q14324 1141 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 SYCP1Q15431 976 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 GNPTABQ3T906 1256 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 PERM1Q5SV97 790 aa6.42□□□□□ -1.38
CD47-205ENST00000517766 ZNF746Q6NUN9 644 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms