RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 SNX29Q8TEQ0 813 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 BCL7CQ8WUZ0 217 aaPredicted RBP11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 COL26A1Q96A83 441 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 GAD1Q99259 594 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 ZBP1Q9H171 429 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 BHMT2Q9H2M3 363 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 MFSD1Q9H3U5 465 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 DDX19AQ9NUU7 478 aaKnown RBP11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 DAXXQ9UER7 740 aaPredicted RBP11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 DNM3Q9UQ16 869 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 SMC3Q9UQE7 1217 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 HES2Q9Y543 173 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 PKD1L2Q7Z442 2459 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 FRYQ5TBA9 3013 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 ACKR2O00590 384 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 NRP1O14786 923 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 NR1I2O75469 434 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 NPTXRO95502 500 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 MLH1P40692 756 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 IL17AQ16552 155 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 MAPK6Q16659 721 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 TPRNQ4KMQ1 711 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 COLGALT2Q8IYK4 626 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 SUMF1Q8NBK3 374 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 BSNDQ8WZ55 320 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 RUBCNQ92622 972 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 KIFAP3Q92845 792 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 IFT74Q96LB3 600 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 APOL6Q9BWW8 343 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 VN1R3Q9BXE9 311 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 MIOSQ9NXC5 875 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 PARP2Q9UGN5 583 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 NR2E1Q9Y466 385 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 ZZEF1O43149 2961 aa11.67□□□□□ -0.54
PDGFRB-203ENST00000517660 N4BP3O15049 544 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 PRKCBP05771 671 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 AKAP5P24588 427 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 OR1G1P47890 313 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 SCNN1GP51170 649 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 EFNA5P52803 228 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 ATP2C1P98194 919 aaPredicted RBP11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 DSC1Q08554 894 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 PRPF4BQ13523 1007 aaKnown RBP11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 TMEM132AQ24JP5 1023 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 LARP1BQ659C4 914 aaKnown RBP11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 PPFIBP1Q86W92 1011 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 CDR2LQ86X02 465 aaPredicted RBP11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 AUTS2Q8WXX7 1259 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 RIN2Q8WYP3 895 aaPredicted RBP11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 ZFP42Q96MM3 310 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 COLEC11Q9BWP8 271 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 EMILIN2Q9BXX0 1053 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 NXF3Q9H4D5 531 aaKnown RBP11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 LIMD1Q9UGP4 676 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 HCFC2Q9Y5Z7 792 aa11.66□□□□□ -0.54
PDGFRB-203ENST00000517660 SPTBN2O15020 2390 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 PP2D1A8MPX8 630 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 E9PMD0 336 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 LILRB3O75022 631 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 SOD2P04179 222 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 ADRB1P08588 477 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 WEE2P0C1S8 567 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 LIG1P18858 919 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 CDC25AP30304 524 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 ITIH3Q06033 890 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 PTPN14Q15678 1187 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 ARL6IP4Q66PJ3 421 aaKnown RBP11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 CES5AQ6NT32 575 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 ZDHHC14Q8IZN3 488 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 KCTD17Q8N5Z5 321 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 GSTCDQ8NEC7 633 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 SLC22A17Q8WUG5 538 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 KLHL5Q96PQ7 755 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 ADPGKQ9BRR6 497 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 MMTAG2Q9BU76 263 aaKnown RBP11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 CCDC113Q9H0I3 377 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 ADAM7Q9H2U9 754 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 PDZD7Q9H5P4 517 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 POLD4Q9HCU8 107 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 MRPL17Q9NRX2 175 aaKnown RBP11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 DZANK1Q9NVP4 752 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 MARCH5Q9NX47 278 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 SSX2IPQ9Y2D8 614 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 PRG3Q9Y2Y8 225 aaPredicted RBP11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 GPR179Q6PRD1 2367 aa11.65□□□□□ -0.54
PDGFRB-203ENST00000517660 ZMYM2Q9UBW7 1377 aa11.65□□□□□ -0.55
PDGFRB-203ENST00000517660 DCDC2BA2VCK2 349 aa11.64□□□□□ -0.55
PDGFRB-203ENST00000517660 TTLL13PA6NNM8 815 aa11.64□□□□□ -0.55
PDGFRB-203ENST00000517660 K7ERI5 159 aa11.64□□□□□ -0.55
PDGFRB-203ENST00000517660 SSBP05455 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
PDGFRB-203ENST00000517660 KLRC2P26717 231 aa11.64□□□□□ -0.55
PDGFRB-203ENST00000517660 GRIK3Q13003 919 aa11.64□□□□□ -0.55
PDGFRB-203ENST00000517660 CUL4AQ13619 759 aa11.64□□□□□ -0.55
PDGFRB-203ENST00000517660 RINT1Q6NUQ1 792 aa11.64□□□□□ -0.55
PDGFRB-203ENST00000517660 KANK3Q6NY19 840 aa11.64□□□□□ -0.55
PDGFRB-203ENST00000517660 C1orf186Q6ZWK4 172 aa11.64□□□□□ -0.55
PDGFRB-203ENST00000517660 TAS1R1Q7RTX1 841 aa11.64□□□□□ -0.55
PDGFRB-203ENST00000517660 NECTIN4Q96NY8 510 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms