RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PAPOLAP51003 745 aaKnown RBP7.09□□□□□ -1.28
CPNE3-203ENST00000517490 POLGP54098 1239 aaPredicted RBP7.09□□□□□ -1.28
CPNE3-203ENST00000517490 TCP10Q12799 353 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 XKR9Q5GH70 373 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 MOXD1Q6UVY6 613 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 ENOSF1Q7L5Y1 443 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 CATSPER3Q86XQ3 398 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 TRIM63Q969Q1 353 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 SUDS3Q9H7L9 328 aaPredicted RBP7.09□□□□□ -1.28
CPNE3-203ENST00000517490 NDE1Q9NXR1 346 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 KCND2Q9NZV8 630 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 PDP2Q9P2J9 529 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 PHTF1Q9UMS5 762 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.09□□□□□ -1.28
CPNE3-203ENST00000517490 NCANO14594 1321 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 KIAA0391O15091 583 aaKnown RBP7.08□□□□□ -1.28
CPNE3-203ENST00000517490 PPIP5K2O43314 1243 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 BMP3P12645 472 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 AKR1B1P15121 316 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 CNGA1P29973 690 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 SERPINB6P35237 376 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 MAGEA4P43358 317 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 RASA3Q14644 834 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 IRF2BP2Q7Z5L9 587 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 ATP11CQ8NB49 1132 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 SPDYE1Q8NFV5 336 aaPredicted RBP7.08□□□□□ -1.28
CPNE3-203ENST00000517490 MAML1Q92585 1016 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 ALKBH8Q96BT7 664 aaKnown RBP7.08□□□□□ -1.28
CPNE3-203ENST00000517490 C9orf72Q96LT7 481 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 PAPOLBQ9NRJ5 636 aaKnown RBP7.08□□□□□ -1.28
CPNE3-203ENST00000517490 GTF3C4Q9UKN8 822 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 KIF1AQ12756 1690 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 SMIM22K7EJ46 135 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 POLR2BP30876 1174 aaKnown RBP7.08□□□□□ -1.28
CPNE3-203ENST00000517490 PIK3CAP42336 1068 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 KCNJ2P63252 427 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 AUHQ13825 339 aaKnown RBP7.08□□□□□ -1.28
CPNE3-203ENST00000517490 ABCB5Q2M3G0 1257 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 KRT39Q6A163 491 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 RAB3IL1Q8TBN0 382 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 ATP8B4Q8TF62 1192 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 CKAP2Q8WWK9 683 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 PIK3R5Q8WYR1 880 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 DNAJC19Q96DA6 116 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 POLR3CQ9BUI4 534 aaPredicted RBP7.08□□□□□ -1.28
CPNE3-203ENST00000517490 MIS12Q9H081 205 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 PSMC3IPQ9P2W1 217 aaPredicted RBP7.08□□□□□ -1.28
CPNE3-203ENST00000517490 PCDHB4Q9Y5E5 795 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 ZC3H4Q9UPT8 1303 aaKnown RBP7.08□□□□□ -1.28
CPNE3-203ENST00000517490 CYP26A1O43174 497 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 MED24O75448 989 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 WFS1O76024 890 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 NOL4O94818 638 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 GZMAP12544 262 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 CALB2P22676 271 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 PGM1P36871 562 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 FLT3P36888 993 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 SKIV2L2P42285 1042 aaKnown RBP7.08□□□□□ -1.28
CPNE3-203ENST00000517490 NCALDP61601 193 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 DNAJC3Q13217 504 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 TRPC3Q13507 836 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 BBS9Q3SYG4 887 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 CCDC14Q49A88 953 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 BRDTQ58F21 947 aaPredicted RBP7.08□□□□□ -1.28
CPNE3-203ENST00000517490 DAB2IPQ5VWQ8 1189 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 RNF43Q68DV7 783 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 KCNK18Q7Z418 384 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 DNAAF5Q86Y56 855 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 ZBED8Q8IZ13 594 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 STK32AQ8WU08 396 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 SLC35C1Q96A29 364 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 FAM161BQ96MY7 647 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 NUDT12Q9BQG2 462 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 CD209Q9NNX6 404 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 ADAM22Q9P0K1 906 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 PPARGC1AQ9UBK2 798 aaKnown RBP7.08□□□□□ -1.28
CPNE3-203ENST00000517490 PCYOX1Q9UHG3 505 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 HAO1Q9UJM8 370 aa7.08□□□□□ -1.28
CPNE3-203ENST00000517490 MAGEA13PA6NCF6 341 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 HOXA13P31271 388 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 CASP4P49662 377 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 LIG4P49917 911 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 YWHAEP62258 255 aaKnown RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 PDIA2Q13087 525 aaKnown RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 GPS1Q13098 491 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 TTBK2Q6IQ55 1244 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 PADI6Q6TGC4 694 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 CCDC125Q86Z20 511 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 HS6ST3Q8IZP7 471 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 INPP5DQ92835 1189 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 DDX27Q96GQ7 796 aaKnown RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 NPHS2Q9NP85 383 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 MTO1Q9Y2Z2 717 aaKnown RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 FOXN3O00409 490 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 GNAT1P11488 350 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 PTPN4P29074 926 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 KPNB1Q14974 876 aaKnown RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 ACCSLQ4AC99 568 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 C1orf146Q5VVC0 180 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 DNAJC24Q6P3W2 148 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms