RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 ZNF185O15231 689 aa16.68■□□□□ 0.26
THUMPD3-210ENST00000515662 TNFAIP3P21580 790 aa16.68■□□□□ 0.26
THUMPD3-210ENST00000515662 MAPK6Q16659 721 aa16.68■□□□□ 0.26
THUMPD3-210ENST00000515662 NPLOC4Q8TAT6 608 aa16.68■□□□□ 0.26
THUMPD3-210ENST00000515662 CAPZA3Q96KX2 299 aa16.68■□□□□ 0.26
THUMPD3-210ENST00000515662 MMS19Q96T76 1030 aa16.68■□□□□ 0.26
THUMPD3-210ENST00000515662 AGPAT1Q99943 283 aa16.68■□□□□ 0.26
THUMPD3-210ENST00000515662 TLR10Q9BXR5 811 aa16.68■□□□□ 0.26
THUMPD3-210ENST00000515662 PTPRJQ12913 1337 aa16.68■□□□□ 0.26
THUMPD3-210ENST00000515662 ZNF236Q9UL36 1845 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 CLDN3O15551 220 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 NCK2O43639 380 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 TOM1L1O75674 476 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 PRKCBP05771 671 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 GJB1P08034 283 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 INSRRP14616 1297 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 SMPD1P17405 629 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 CLCN3P51790 818 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 TFDP1Q14186 410 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 ZACNQ401N2 412 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 LMBRD2Q68DH5 695 aaPredicted RBP16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 CHADLQ6NUI6 762 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 METTL13Q8N6R0 699 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 SLC20A1Q8WUM9 679 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 ACO2Q99798 780 aaKnown RBP16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 ZNF446Q9NWS9 450 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 GRID2IPA4D2P6 1211 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 ZC3H11AO75152 810 aaKnown RBP eCLIP16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 PPFIA4O75335 1185 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 C4BPAP04003 597 aaKnown RBP16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 ZNF286BP0CG31 522 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 TNNI1P19237 187 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 USP8P40818 1118 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 ZNF157P51786 506 aaPredicted RBP16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 GALCP54803 685 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 CKAP4Q07065 602 aaKnown RBP16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 ACVR2BQ13705 512 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 DUSP28Q4G0W2 176 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 OSBPL9Q96SU4 736 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 C16orf70Q9BSU1 422 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 ABHD16BQ9H3Z7 469 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 ST7Q9NRC1 585 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 HYOU1Q9Y4L1 999 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 CNTNAP2Q9UHC6 1331 aa16.67■□□□□ 0.26
THUMPD3-210ENST00000515662 A0A0A6YYK5 440 aaPredicted RBP16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 ASAP2O43150 1006 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 FAM189A1O60320 539 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 HARSP12081 509 aaKnown RBP16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 TCP1P17987 556 aaKnown RBP16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 IGBP1P78318 339 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 TDRD10Q5VZ19 366 aaKnown RBP16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 NFRKBQ6P4R8 1299 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 COG1Q8WTW3 980 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 TATDN2Q93075 761 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 NLRP4Q96MN2 994 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 PI4K2AQ9BTU6 479 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 TSKSQ9UJT2 592 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 MANSC4A6NHS7 340 aaPredicted RBP16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 PDE2AO00408 941 aaPredicted RBP16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 SGPL1O95470 568 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 IFI16Q16666 785 aaKnown RBP16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 SEZ6Q53EL9 994 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 IQSEC1Q6DN90 963 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 PALB2Q86YC2 1186 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 CREG2Q8IUH2 290 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 NOA1Q8NC60 698 aaKnown RBP16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 ELMO3Q96BJ8 720 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 CGRRF1Q99675 332 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 FZD8Q9H461 694 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 MYH10P35580 1976 aa16.66■□□□□ 0.26
THUMPD3-210ENST00000515662 TRPM7Q96QT4 1865 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 TMCO5BA8MYB1 307 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 ABLIM1O14639 778 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 CYP26A1O43174 497 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 FTCDO95954 541 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 NOP2P46087 812 aaKnown RBP16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 PTENP60484 403 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 GCNT1Q02742 428 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 MORN1Q5T089 497 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 MEI1Q5TIA1 1274 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 ZBTB33Q86T24 672 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 MSL3Q8N5Y2 521 aaKnown RBP16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 EPS8L1Q8TE68 723 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 ZNF668Q96K58 619 aaPredicted RBP16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 TCHPQ9BT92 498 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 PARD6BQ9BYG5 372 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 ANKZF1Q9H8Y5 726 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 ZCCHC17Q9NP64 241 aaKnown RBP16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 SEPT11Q9NVA2 429 aaKnown RBP16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 SLC5A4Q9NY91 659 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 TAS2R14Q9NYV8 317 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 NOCTQ9UK39 431 aaKnown RBP16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 MAGEB2O15479 319 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 HLA-DRAP01903 254 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 TMEM253P0C7T8 217 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 HOXD8P13378 290 aaPredicted RBP16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 MCL1Q07820 350 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 TSHZ1Q6ZSZ6 1077 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 ENOSF1Q7L5Y1 443 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms