RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 DRC1Q96MC2 740 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 TBC1D32Q96NH3 1257 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 RXFP1Q9HBX9 757 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 MAN1C1Q9NR34 630 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 SNTG2Q9NY99 539 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.26■□□□□ 0.67
DDX41-217ENST00000515562 TRIOO75962 3097 aa19.25■□□□□ 0.67
DDX41-217ENST00000515562 E9PMD0 336 aa19.25■□□□□ 0.67
DDX41-217ENST00000515562 K7ERI5 159 aa19.25■□□□□ 0.67
DDX41-217ENST00000515562 C1RP00736 705 aa19.25■□□□□ 0.67
DDX41-217ENST00000515562 THP07101 528 aa19.25■□□□□ 0.67
DDX41-217ENST00000515562 IL17AQ16552 155 aa19.25■□□□□ 0.67
DDX41-217ENST00000515562 ATF7IP2Q5U623 682 aa19.25■□□□□ 0.67
DDX41-217ENST00000515562 CCDC149Q6ZUS6 474 aa19.25■□□□□ 0.67
DDX41-217ENST00000515562 PLCD3Q8N3E9 789 aa19.25■□□□□ 0.67
DDX41-217ENST00000515562 MMTAG2Q9BU76 263 aaKnown RBP19.25■□□□□ 0.67
DDX41-217ENST00000515562 TIPINQ9BVW5 301 aa19.25■□□□□ 0.67
DDX41-217ENST00000515562 C17orf75Q9HAS0 396 aa19.25■□□□□ 0.67
DDX41-217ENST00000515562 SMC3Q9UQE7 1217 aa19.25■□□□□ 0.67
DDX41-217ENST00000515562 PLXNA3P51805 1871 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 CCDC169A6NNP5 214 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 PTGESO14684 152 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 HIP1RO75146 1068 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 TADA2AO75478 443 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 EDN1P05305 212 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 CDC25AP30304 524 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 NPTX2P47972 431 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 PEX3P56589 373 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 MTMR3Q13615 1198 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 EEF1DP3Q658K8 133 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 ARL6IP4Q66PJ3 421 aaKnown RBP19.24■□□□□ 0.67
DDX41-217ENST00000515562 KANK3Q6NY19 840 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 SUGP1Q8IWZ8 645 aaKnown RBP19.24■□□□□ 0.67
DDX41-217ENST00000515562 ZDHHC14Q8IZN3 488 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 CMASQ8NFW8 434 aaPredicted RBP19.24■□□□□ 0.67
DDX41-217ENST00000515562 PBXIP1Q96AQ6 731 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 GPR62Q9BZJ7 368 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 NT5C3AQ9H0P0 336 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 FNIP2Q9P278 1114 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 SORCS3Q9UPU3 1222 aa19.24■□□□□ 0.67
DDX41-217ENST00000515562 CASTOR2A6NHX0 329 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 HYIQ5T013 277 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 NT5DC1Q5TFE4 455 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 RINT1Q6NUQ1 792 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 CYP26C1Q6V0L0 522 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 UBALD2Q8IYN6 164 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 DAW1Q8N136 415 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 KREMEN2Q8NCW0 462 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 HDAC7Q8WUI4 952 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 RIN2Q8WYP3 895 aaPredicted RBP19.23■□□□□ 0.67
DDX41-217ENST00000515562 ACSF2Q96CM8 615 aaPredicted RBP19.23■□□□□ 0.67
DDX41-217ENST00000515562 RUSC1Q9BVN2 902 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 RHOBTB2Q9BYZ6 727 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 TMEM134Q9H6X4 195 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 POLD4Q9HCU8 107 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 ARHGAP28Q9P2N2 729 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 TNFSF13BQ9Y275 285 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 USP20Q9Y2K6 914 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 GDAQ9Y2T3 454 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 RBM19Q9Y4C8 960 aaKnown RBP19.23■□□□□ 0.67
DDX41-217ENST00000515562 ZNF318Q5VUA4 2279 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 C2orf16Q68DN1 1984 aa19.23■□□□□ 0.67
DDX41-217ENST00000515562 VWA3AA6NCI4 1184 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 KIF4AO95239 1232 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 GUCY2CP25092 1073 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 ELAVL2Q12926 359 aaKnown RBP19.22■□□□□ 0.67
DDX41-217ENST00000515562 ZRSR1Q15695 479 aaKnown RBP19.22■□□□□ 0.67
DDX41-217ENST00000515562 C1orf186Q6ZWK4 172 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 OTOP3Q7RTS5 596 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 KCNK18Q7Z418 384 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 RABGGTAQ92696 567 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 ASIC4Q96FT7 647 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 CDK5RAP3Q96JB5 506 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 B3GALT6Q96L58 329 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 PAAF1Q9BRP4 392 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 MRPL4Q9BYD3 311 aaKnown RBP19.22■□□□□ 0.67
DDX41-217ENST00000515562 PLEKHA4Q9H4M7 779 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 KMT5AQ9NQR1 393 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 TOPORSQ9NS56 1045 aaPredicted RBP19.22■□□□□ 0.67
DDX41-217ENST00000515562 KCND2Q9NZV8 630 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 CACNG4Q9UBN1 327 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 KCNG1Q9UIX4 513 aa19.22■□□□□ 0.67
DDX41-217ENST00000515562 MAPK7Q13164 816 aa19.21■□□□□ 0.67
DDX41-217ENST00000515562 NAB2Q15742 525 aa19.21■□□□□ 0.67
DDX41-217ENST00000515562 ZNF568Q3ZCX4 644 aa19.21■□□□□ 0.67
DDX41-217ENST00000515562 FBXL6Q8N531 539 aa19.21■□□□□ 0.67
DDX41-217ENST00000515562 HASPINQ8TF76 798 aa19.21■□□□□ 0.67
DDX41-217ENST00000515562 AK8Q96MA6 479 aa19.21■□□□□ 0.67
DDX41-217ENST00000515562 MUC6Q6W4X9 2439 aa19.21■□□□□ 0.67
DDX41-217ENST00000515562 CCDC195A0A1B0GUA6 201 aa19.2■□□□□ 0.66
DDX41-217ENST00000515562 SLC26A4O43511 780 aa19.2■□□□□ 0.66
DDX41-217ENST00000515562 BMP15O95972 392 aa19.2■□□□□ 0.66
DDX41-217ENST00000515562 GRM5P41594 1212 aa19.2■□□□□ 0.66
DDX41-217ENST00000515562 YARSP54577 528 aaKnown RBP19.2■□□□□ 0.66
DDX41-217ENST00000515562 RTP2Q5QGT7 225 aa19.2■□□□□ 0.66
DDX41-217ENST00000515562 LARP1BQ659C4 914 aaKnown RBP19.2■□□□□ 0.66
DDX41-217ENST00000515562 PDXDC1Q6P996 788 aa19.2■□□□□ 0.66
DDX41-217ENST00000515562 BRAPQ7Z569 592 aa19.2■□□□□ 0.66
DDX41-217ENST00000515562 UROC1Q96N76 676 aa19.2■□□□□ 0.66
DDX41-217ENST00000515562 ACO2Q99798 780 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms