RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 GUCY2CP25092 1073 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 PEX3P56589 373 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 ZXDAP98168 799 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 DMP1Q13316 513 aaPredicted RBP11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 HSP90AA2PQ14568 343 aaPredicted RBP11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 LARP1BQ659C4 914 aaKnown RBP11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 TAS1R3Q7RTX0 852 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 BRAPQ7Z569 592 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 GPR65Q8IYL9 337 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 FEZF2Q8TBJ5 459 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 PAAF1Q9BRP4 392 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 GPR62Q9BZJ7 368 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 CXCL16Q9H2A7 254 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 TMEM134Q9H6X4 195 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 C17orf75Q9HAS0 396 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 CACNG4Q9UBN1 327 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 TNFSF13BQ9Y275 285 aa11.51□□□□□ -0.57
HMGXB3-205ENST00000514469 CASTOR2A6NHX0 329 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 CCDC169A6NNP5 214 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 C2CD4DB7Z1M9 353 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 K7ERI5 159 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 SLC26A4O43511 780 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 KIF4AO95239 1232 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 GLUD1P00367 558 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 C1RP00736 705 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 THP07101 528 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 WEE2P0C1S8 567 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 SP100P23497 879 aaPredicted RBP11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 PLA2G5P39877 138 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 SLC12A3P55017 1021 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 PTPN21Q16825 1174 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 USP41Q3LFD5 358 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 KANK3Q6NY19 840 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 TMC5Q6UXY8 1006 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 HFE2Q6ZVN8 426 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 APBB1IPQ7Z5R6 666 aaPredicted RBP11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 GPR149Q86SP6 731 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 SYT2Q8N9I0 419 aaPredicted RBP11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 CMASQ8NFW8 434 aaPredicted RBP11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 RABGGTAQ92696 567 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 B3GALT6Q96L58 329 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 AK8Q96MA6 479 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 ACO2Q99798 780 aaKnown RBP11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 MRPL4Q9BYD3 311 aaKnown RBP11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 CDT1Q9H211 546 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 PTPRHQ9HD43 1115 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 KMT5AQ9NQR1 393 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 MAN1C1Q9NR34 630 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 TSHZ2Q9NRE2 1034 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 KCND2Q9NZV8 630 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 FNIP2Q9P278 1114 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 GDAQ9Y2T3 454 aa11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 SF3B1O75533 1304 aaKnown RBP eCLIP11.5□□□□□ -0.57
HMGXB3-205ENST00000514469 PLXNA3P51805 1871 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 ABLIM1O14639 778 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 PAPLNO95428 1278 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 BMP15O95972 392 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 PLS3P13797 630 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 PROZP22891 400 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 GRM5P41594 1212 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 CREMQ03060 361 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 ZRSR1Q15695 479 aaKnown RBP11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 ZNF568Q3ZCX4 644 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 RTP2Q5QGT7 225 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 ATAT1Q5SQI0 421 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 C15orf39Q6ZRI6 1047 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 TRIM67Q6ZTA4 783 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 CEP120Q8N960 986 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 HASPINQ8TF76 798 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 SPIRE2Q8WWL2 714 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 CDK5RAP3Q96JB5 506 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 PPP1R10Q96QC0 940 aaKnown RBP11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 NTPCRQ9BSD7 190 aaKnown RBP11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 RHOBTB2Q9BYZ6 727 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 USTQ9Y2C2 406 aa11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 RBM19Q9Y4C8 960 aaKnown RBP11.49□□□□□ -0.57
HMGXB3-205ENST00000514469 VPS37CA5D8V6 355 aaPredicted RBP11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 TMEM221A6NGB7 291 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 SPDYE4A6NLX3 237 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 TMEM189-UBE2V1I3L0A0 370 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 M0R296 226 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 SLC16A4O15374 487 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 TADA2AO75478 443 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 BRD1O95696 1058 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 PLA2G4BP0C869 781 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 MCF2P10911 925 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 LONP1P36776 959 aaKnown RBP11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 SIGLEC14Q08ET2 396 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 RAD51AP2Q09MP3 1159 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 XKR4Q5GH76 650 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 GLRA4Q5JXX5 417 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 ELMSAN1Q6PJG2 1045 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 MPZL3Q6UWV2 235 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 BMP8AQ7Z5Y6 402 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 ZDHHC14Q8IZN3 488 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 TDRD5Q8NAT2 981 aaKnown RBP11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 TMEM161BQ8NDZ6 487 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 LRRC15Q8TF66 581 aa11.48□□□□□ -0.57
HMGXB3-205ENST00000514469 HDAC7Q8WUI4 952 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms