RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SEL1LQ9UBV2 794 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 PARP2Q9UGN5 583 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 USP20Q9Y2K6 914 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 GIT1Q9Y2X7 761 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 PCDHB12Q9Y5F1 795 aa9.11□□□□□ -0.95
CCL28-204ENST00000514421 MICAL3Q7RTP6 2002 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 CARNS1A5YM72 827 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 EPOPA6NHQ4 379 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 MEIS3P2A8K0S8 358 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 GOLGA6L19H0YKK7 550 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 GTPBP6O43824 516 aaPredicted RBP9.1□□□□□ -0.95
CCL28-204ENST00000514421 SMC2O95347 1197 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 ALDH2P05091 517 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 EDN1P05305 212 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 IDEP14735 1019 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 FOSL2P15408 326 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 LAG3P18627 525 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 ERCC5P28715 1186 aaPredicted RBP9.1□□□□□ -0.95
CCL28-204ENST00000514421 NMT1P30419 496 aaKnown RBP9.1□□□□□ -0.95
CCL28-204ENST00000514421 CTNNB1P35222 781 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 ALDH7A1P49419 539 aaKnown RBP9.1□□□□□ -0.95
CCL28-204ENST00000514421 ADGRE1Q14246 886 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 DCAF4L1Q3SXM0 396 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 EEF1DP3Q658K8 133 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 CNNM4Q6P4Q7 775 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 ZPBP2Q6X784 338 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 CCDC65Q8IXS2 484 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 LRRC43Q8N309 656 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 URGCPQ8TCY9 931 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 ERCC4Q92889 916 aaPredicted RBP9.1□□□□□ -0.95
CCL28-204ENST00000514421 P2RX5Q93086 422 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 PAGE5Q96GU1 130 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 FAM193BQ96PV7 902 aaPredicted RBP9.1□□□□□ -0.95
CCL28-204ENST00000514421 FIZ1Q96SL8 496 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 C11orf84Q9BUA3 381 aaPredicted RBP9.1□□□□□ -0.95
CCL28-204ENST00000514421 APOL6Q9BWW8 343 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 MRPL44Q9H9J2 332 aaKnown RBP9.1□□□□□ -0.95
CCL28-204ENST00000514421 SNTG2Q9NY99 539 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 MAN1B1Q9UKM7 699 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 TBX20Q9UMR3 447 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 PLAGL2Q9UPG8 496 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 HES2Q9Y543 173 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 PCDHB13Q9Y5F0 798 aa9.1□□□□□ -0.95
CCL28-204ENST00000514421 MYO7AQ13402 2215 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 LOXHD1Q8IVV2 1947 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 PVALEFA0A1B0GWK0 134 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 FRMD3A2A2Y4 597 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 ARL5CA6NH57 179 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 BECN2A8MW95 431 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 K7ENM7 598 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 INPPL1O15357 1258 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 CLDN3O15551 220 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 LPXNO60711 386 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 TOM1L1O75674 476 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 POMCP01189 267 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 MCF2P10911 925 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 PROZP22891 400 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 AKAP5P24588 427 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 AFMP43652 599 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 MYL5Q02045 173 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 RNASELQ05823 741 aaKnown RBP9.09□□□□□ -0.95
CCL28-204ENST00000514421 PTPROQ16827 1216 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 KCNT2Q6UVM3 1135 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 ZBTB33Q86T24 672 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 SFR1Q86XK3 245 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 AOPEPQ8N6M6 819 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 KLHL23Q8NBE8 558 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 COLGALT1Q8NBJ5 622 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 SPPL3Q8TCT6 385 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 SMARCE1Q969G3 411 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 HVCN1Q96D96 273 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 ZBTB45Q96K62 511 aaPredicted RBP9.09□□□□□ -0.95
CCL28-204ENST00000514421 ZNF558Q96NG5 402 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 GAD1Q99259 594 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 STRA6Q9BX79 667 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 TRIM9Q9C026 710 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 LMAN2LQ9H0V9 348 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 NXF3Q9H4D5 531 aaKnown RBP9.09□□□□□ -0.95
CCL28-204ENST00000514421 NRDE2Q9H7Z3 1164 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 OLFML3Q9NRN5 406 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 TBC1D13Q9NVG8 400 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 MIOSQ9NXC5 875 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 SPG21Q9NZD8 308 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 PUF60Q9UHX1 559 aaKnown RBP9.09□□□□□ -0.95
CCL28-204ENST00000514421 DACH1Q9UI36 760 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 INPP5FQ9Y2H2 1132 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 MTCH2Q9Y6C9 303 aa9.09□□□□□ -0.95
CCL28-204ENST00000514421 PRRC2BQ5JSZ5 2229 aaKnown RBP9.08□□□□□ -0.96
CCL28-204ENST00000514421 GOLGA6L6A8MZA4 724 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 SLC34A2O95436 690 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 PIGRP01833 764 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 ITGB1P05556 798 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 GALTP07902 379 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 ZNF18P17022 549 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 GRM5P41594 1212 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 LIG4P49917 911 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 AFF1P51825 1210 aaKnown RBP9.08□□□□□ -0.96
CCL28-204ENST00000514421 ASIC1P78348 528 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 PLCB3Q01970 1234 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 KRT17Q04695 432 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms