RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	FAM30A	Q9NZY2	134 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	GPR45	Q9Y5Y3	372 aa		5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	WDR33	Q9C0J8	1336 aa	Known RBP	5.71	□□□□□ -1.5
MATR3-223	ENST00000514402	FAM20B	O75063	409 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	SCAF4	O95104	1147 aa	Known RBP	5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	SPATA31D3	P0C874	917 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	AGXT	P21549	392 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	INHBC	P55103	352 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	KRT85	P78386	507 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	LRRC55	Q6ZSA7	311 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	SPATA31D4	Q6ZUB0	917 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402		Q6ZVL8	140 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	GDF7	Q7Z4P5	450 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	MRGPRE	Q86SM8	312 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	XYLT1	Q86Y38	959 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	CNTD1	Q8N815	330 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	CPT1C	Q8TCG5	803 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	COG1	Q8WTW3	980 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	CASKIN2	Q8WXE0	1202 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	TFAP2C	Q92754	450 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	CEP95	Q96GE4	821 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	FAM126A	Q9BYI3	521 aa	Predicted RBP	5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	NRDE2	Q9H7Z3	1164 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	SPON1	Q9HCB6	807 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	LANCL2	Q9NS86	450 aa		5.7	□□□□□ -1.5
MATR3-223	ENST00000514402	TMEM191C	A6NGB0	347 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	TEX33	O43247	280 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	ALOX15	P16050	662 aa	Predicted RBP	5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	ADSL	P30566	484 aa	Predicted RBP	5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	GUCY1A2	P33402	732 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	PTPN7	P35236	360 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	SREBF1	P36956	1147 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	CLRN1	P58418	232 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	CCT2	P78371	535 aa	Known RBP	5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	PPP3CA	Q08209	521 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	INAVA	Q3KP66	663 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	RRP12	Q5JTH9	1297 aa	Known RBP	5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	MFSD14B	Q5SR56	506 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	LY6G5C	Q5SRR4	150 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	PLXDC1	Q8IUK5	500 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	DRC7	Q8IY82	874 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	OR10H5	Q8NGA6	315 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	NEU4	Q8WWR8	484 aa	Predicted RBP	5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	LARP4B	Q92615	738 aa	Known RBP	5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	MYEOV	Q96EZ4	313 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	UHRF1	Q96T88	793 aa	Predicted RBP	5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	CHST2	Q9Y4C5	530 aa		5.69	□□□□□ -1.5
MATR3-223	ENST00000514402	ATRNL1	Q5VV63	1379 aa		5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	CXorf49	A8MYA2	514 aa	Predicted RBP	5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	AHRR	A9YTQ3	701 aa		5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	RNASET2	O00584	256 aa	Known RBP	5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	LAG3	P18627	525 aa		5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	APOBEC3A	P31941	199 aa	Predicted RBP	5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	WAS	P42768	502 aa		5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	PER3	P56645	1201 aa		5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	ANKS6	Q68DC2	871 aa		5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	ARMC6	Q6NXE6	501 aa		5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	PQLC1	Q8N2U9	271 aa		5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	MANSC1	Q9H8J5	431 aa		5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	POGK	Q9P215	609 aa		5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	ING1	Q9UK53	422 aa	Predicted RBP	5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	HS3ST4	Q9Y661	456 aa		5.68	□□□□□ -1.5
MATR3-223	ENST00000514402	ALG1L2	C9J202	215 aa		5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	ADCY6	O43306	1168 aa		5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	ABHD16A	O95870	558 aa		5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	ZSCAN20	P17040	1043 aa	Predicted RBP	5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	NR4A1	P22736	598 aa		5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	CANX	P27824	592 aa	Known RBP	5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	BMPR1A	P36894	532 aa		5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	NHLH2	Q02577	135 aa		5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	CSRP2	Q16527	193 aa		5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	OTUD7B	Q6GQQ9	843 aa		5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	SLITRK6	Q9H5Y7	841 aa		5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	TMEM140	Q9NV12	185 aa		5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	TRPM5	Q9NZQ8	1165 aa		5.67	□□□□□ -1.5
MATR3-223	ENST00000514402	LEFTY2	O00292	366 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	RPS6KA4	O75676	772 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	HLA-DOA	P06340	250 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	OSM	P13725	252 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	GSPT1	P15170	499 aa	Known RBP	5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	TAP1	Q03518	808 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	NOMO1	Q15155	1222 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	PTPA	Q15257	358 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	TIGD2	Q4W5G0	525 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	SYDE2	Q5VT97	1194 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	KCNV1	Q6PIU1	500 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	MRGPRG	Q86SM5	289 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	LDLRAD3	Q86YD5	345 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	SYT12	Q8IV01	421 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	CBARP	Q8N350	705 aa	Predicted RBP	5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	C1orf162	Q8NEQ5	155 aa	Predicted RBP	5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	REPS2	Q8NFH8	660 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	PROKR1	Q8TCW9	393 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	SENP6	Q9GZR1	1112 aa	Predicted RBP	5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	DMRT3	Q9NQL9	472 aa		5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	SAP30BP	Q9UHR5	308 aa	Known RBP	5.66	□□□□□ -1.5
MATR3-223	ENST00000514402	PCDHGA2	Q9Y5H1	932 aa		5.66	□□□□□ -1.5

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