RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 EPS8L1Q8TE68 723 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 ZNF700Q9H0M5 742 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 MRM3Q9HC36 420 aaKnown RBP7.72□□□□□ -1.17
NIPBL-208ENST00000514335 MRS2Q9HD23 443 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 IL37Q9NZH6 218 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 MTRRQ9UBK8 725 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 L1RE1Q9UN81 338 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 FADS3Q9Y5Q0 445 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 SNX8Q9Y5X2 465 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 MAP3K19Q56UN5 1328 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 A0A0G2JPF8 293 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 CCDC78A2IDD5 438 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 KLRG2A4D1S0 409 aaPredicted RBP7.72□□□□□ -1.17
NIPBL-208ENST00000514335 DPPA5A6NC42 116 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 SNTNA6NMZ2 147 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 HNRNPCL3B7ZW38 293 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 APAF1O14727 1248 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 MGRN1O60291 552 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 SMPD2O60906 423 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 RNF40O75150 1001 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 PDHA1P08559 390 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 HNRNPCL4P0DMR1 293 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 RPP30P78346 268 aaKnown RBP7.72□□□□□ -1.17
NIPBL-208ENST00000514335 CDC16Q13042 620 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 SUPT20HL1Q3ZLR7 823 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 TRAPPC3LQ5T215 181 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 RNASEH2BQ5TBB1 312 aaKnown RBP7.72□□□□□ -1.17
NIPBL-208ENST00000514335 SHEQ5VZ18 495 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 ENOSF1Q7L5Y1 443 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 SPATA24Q86W54 205 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 CCDC63Q8NA47 563 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 TTLQ8NG68 377 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 RFWD2Q8NHY2 731 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 ABTB1Q969K4 478 aaPredicted RBP7.72□□□□□ -1.17
NIPBL-208ENST00000514335 ATP6V1G3Q96LB4 118 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 TUT1Q9H6E5 874 aaKnown RBP7.72□□□□□ -1.17
NIPBL-208ENST00000514335 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.72□□□□□ -1.17
NIPBL-208ENST00000514335 CRNNQ9UBG3 495 aaPredicted RBP7.72□□□□□ -1.17
NIPBL-208ENST00000514335 PPARGC1AQ9UBK2 798 aaKnown RBP7.72□□□□□ -1.17
NIPBL-208ENST00000514335 ERVK-19Q9WJR5 959 aa7.72□□□□□ -1.17
NIPBL-208ENST00000514335 GOLGA8CPA6NN73 597 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 GOLGA8RI6L899 631 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 TRDMT1O14717 391 aaKnown RBP7.71□□□□□ -1.18
NIPBL-208ENST00000514335 KMOO15229 486 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 GPR37O15354 613 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 ST18O60284 1047 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 RANBP6O60518 1105 aaKnown RBP7.71□□□□□ -1.18
NIPBL-208ENST00000514335 CDC45O75419 566 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 SLU7O95391 586 aaKnown RBP7.71□□□□□ -1.18
NIPBL-208ENST00000514335 MYL4P12829 197 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 CYP4F8P98187 520 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 ODF1Q14990 250 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 MINDY4Q4G0A6 757 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 OR7E24Q6IFN5 339 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 FASTKD5Q7L8L6 764 aaKnown RBP7.71□□□□□ -1.18
NIPBL-208ENST00000514335 EPHX4Q8IUS5 362 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 PJA1Q8NG27 643 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 EXD1Q8NHP7 514 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 HES6Q96HZ4 224 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 MFSD14AQ96MC6 490 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 SMC6Q96SB8 1091 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 SHCBP1LQ9BZQ2 653 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 RRN3Q9NYV6 651 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 GPRC5BQ9NZH0 403 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 FBXL21Q9UKT6 434 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 CLEC11AQ9Y240 323 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 TNS2Q63HR2 1409 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 DCDC2CA8MYV0 355 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 EBAG9O00559 213 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 NR1I2O75469 434 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 POLR3DP05423 398 aaPredicted RBP7.71□□□□□ -1.18
NIPBL-208ENST00000514335 XPAP23025 273 aaPredicted RBP7.71□□□□□ -1.18
NIPBL-208ENST00000514335 MXRA7P84157 204 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 FOXK2Q01167 660 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 GCNT1Q02742 428 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 MYO1EQ12965 1108 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 ZACNQ401N2 412 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 CLVS2Q5SYC1 327 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 RALYLQ86SE5 291 aaKnown RBP7.71□□□□□ -1.18
NIPBL-208ENST00000514335 ARMC5Q96C12 935 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 FBXL18Q96ME1 805 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 TTC1Q99614 292 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 FSD1Q9BTV5 496 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 MENTQ9BUN1 341 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 NUP58Q9BVL2 599 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 FUT8Q9BYC5 575 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 PITHD1Q9GZP4 211 aaPredicted RBP7.71□□□□□ -1.18
NIPBL-208ENST00000514335 KIAA1551Q9HCM1 1747 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 CYP4F12Q9HCS2 524 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 DACH1Q9UI36 760 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 TTC41PQ6P2S7 1318 aa7.71□□□□□ -1.18
NIPBL-208ENST00000514335 ARFGEF1Q9Y6D6 1849 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 SYNJ2BP-COX16A0A087WUM0 186 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 LRRIQ4A6NIV6 560 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 VSTM5A8MXK1 200 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 FYNP06241 537 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 PPARGP37231 505 aaPredicted RBP7.7□□□□□ -1.18
NIPBL-208ENST00000514335 DIO1P49895 249 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 SCNN1GP51170 649 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 C17orf67Q0P5P2 114 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms