RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 KIAA1683Q9H0B3 1180 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 RPAP3Q9H6T3 665 aaPredicted RBP13.49□□□□□ -0.25
SDHA-216ENST00000514027 BATF3Q9NR55 127 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 PXMP2Q9NR77 195 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 ALG6Q9Y672 507 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 P4HA2O15460 535 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 MARCKSL1P49006 195 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 JAK3P52333 1124 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 NCKAP1LP55160 1127 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 GPC5P78333 572 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 DMP1Q13316 513 aaPredicted RBP13.48□□□□□ -0.25
SDHA-216ENST00000514027 E2F5Q15329 346 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 TBC1D25Q3MII6 688 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 NOP9Q86U38 636 aaKnown RBP13.48□□□□□ -0.25
SDHA-216ENST00000514027 SLC47A2Q86VL8 602 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 C12orf56Q8IXR9 622 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 C4orf19Q8IY42 314 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 UBL4BQ8N7F7 174 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 DRAXINQ8NBI3 349 aaPredicted RBP13.48□□□□□ -0.25
SDHA-216ENST00000514027 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
SDHA-216ENST00000514027 KRT35Q92764 455 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 WNK4Q96J92 1243 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 TOPORSQ9NS56 1045 aaPredicted RBP13.48□□□□□ -0.25
SDHA-216ENST00000514027 DIS3Q9Y2L1 958 aaKnown RBP13.48□□□□□ -0.25
SDHA-216ENST00000514027 FER1L6Q2WGJ9 1857 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 DENND3A2RUS2 1198 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 ZBED4O75132 1171 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 LYPLA2O95372 231 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 KCNA3P22001 575 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 PTENP60484 403 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 DHX9Q08211 1270 aaKnown RBP13.48□□□□□ -0.25
SDHA-216ENST00000514027 DRP2Q13474 957 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 RNF187Q5TA31 235 aaPredicted RBP13.48□□□□□ -0.25
SDHA-216ENST00000514027 CIAPIN1Q6FI81 312 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 TMC3Q7Z5M5 1100 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 EPS8L1Q8TE68 723 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 SEMA4DQ92854 862 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 GLG1Q92896 1179 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 IWS1Q96ST2 819 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 PCDHB18PQ96TA0 734 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 RAB17Q9H0T7 212 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 TMBIM4Q9HC24 238 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 KMT5AQ9NQR1 393 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 FAM114A2Q9NRY5 505 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 TTC7AQ9ULT0 858 aaPredicted RBP13.48□□□□□ -0.25
SDHA-216ENST00000514027 TPX2Q9ULW0 747 aaKnown RBP13.48□□□□□ -0.25
SDHA-216ENST00000514027 TBX20Q9UMR3 447 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 EXOC7Q9UPT5 735 aa13.48□□□□□ -0.25
SDHA-216ENST00000514027 ENO4A6NNW6 628 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 MMEP08473 750 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 RPSAP08865 295 aaKnown RBP13.47□□□□□ -0.25
SDHA-216ENST00000514027 ADSSP30520 456 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 NPTX2P47972 431 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 KRT76Q01546 638 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 ZNF844Q08AG5 666 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 SNX1Q13596 522 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 MTMR3Q13615 1198 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 LRIG3Q6UXM1 1119 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 KLHL23Q8NBE8 558 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 ATG4CQ96DT6 458 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 ZBED3Q96IU2 234 aaPredicted RBP13.47□□□□□ -0.25
SDHA-216ENST00000514027 BTBD6Q96KE9 485 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 KREMEN1Q96MU8 473 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 FMO2Q99518 471 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 ATP8A1Q9Y2Q0 1164 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 SYNGAP1Q96PV0 1343 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 GOLGA6L7A0A1B0GV03 622 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 DLATP10515 647 aaKnown RBP13.47□□□□□ -0.25
SDHA-216ENST00000514027 COMTP21964 271 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 CNGA1P29973 690 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 SFNP31947 248 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 LSP1P33241 339 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 MFAP3P55082 362 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 MAP3K10Q02779 954 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 TNFAIP1Q13829 316 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 BAATQ14032 418 aaPredicted RBP13.47□□□□□ -0.25
SDHA-216ENST00000514027 ODF2Q5BJF6 829 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 C11orf63Q6NUN7 778 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 ANO5Q75V66 913 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 NLRX1Q86UT6 975 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 FUKQ8N0W3 1084 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 TMEM161BQ8NDZ6 487 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 FBXO41Q8TF61 875 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 VTI1AQ96AJ9 217 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 C18orf8Q96DM3 657 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 CEP170P1Q96L14 293 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 TEPSINQ96N21 525 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 TIPINQ9BVW5 301 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 RNF146Q9NTX7 359 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 GABBR1Q9UBS5 961 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 NOCTQ9UK39 431 aaKnown RBP13.47□□□□□ -0.25
SDHA-216ENST00000514027 PFASO15067 1338 aa13.47□□□□□ -0.25
SDHA-216ENST00000514027 BHMG1C9JSJ3 638 aaPredicted RBP13.46□□□□□ -0.25
SDHA-216ENST00000514027 H0YGN5 161 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 CHRNB2P17787 502 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 POU5F1Q01860 360 aaKnown RBP13.46□□□□□ -0.25
SDHA-216ENST00000514027 SEL1L2Q5TEA6 688 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 KRT39Q6A163 491 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 C3orf20Q8ND61 904 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 JDP2Q8WYK2 163 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms