RNA–Protein interactions for RNA: ENST00000512768.1

NME1-210, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 1 (best)

Gene NME1, Length 1,056 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-210ENST00000512768 FTHL17Q9BXU8 183 aa19.53■□□□□ 0.72
NME1-210ENST00000512768 ARMCX3Q9UH62 379 aaPredicted RBP19.53■□□□□ 0.72
NME1-210ENST00000512768 CPSF3Q9UKF6 684 aaKnown RBP19.53■□□□□ 0.72
NME1-210ENST00000512768 TULP1O00294 542 aaPredicted RBP19.52■□□□□ 0.72
NME1-210ENST00000512768 CLTAP09496 248 aa19.52■□□□□ 0.72
NME1-210ENST00000512768 KRT13P13646 458 aa19.52■□□□□ 0.72
NME1-210ENST00000512768 MARSP56192 900 aaKnown RBP19.52■□□□□ 0.72
NME1-210ENST00000512768 CYP24A1Q07973 514 aa19.52■□□□□ 0.72
NME1-210ENST00000512768 TCTN1Q2MV58 587 aa19.52■□□□□ 0.72
NME1-210ENST00000512768 TMEM192Q8IY95 271 aa19.52■□□□□ 0.72
NME1-210ENST00000512768 BORCS6Q96GS4 357 aa19.52■□□□□ 0.72
NME1-210ENST00000512768 CCDC94Q9BW85 323 aaPredicted RBP19.52■□□□□ 0.72
NME1-210ENST00000512768 NXF3Q9H4D5 531 aaKnown RBP19.52■□□□□ 0.72
NME1-210ENST00000512768 METTL14Q9HCE5 456 aaKnown RBP19.52■□□□□ 0.72
NME1-210ENST00000512768 FAM105AQ9NUU6 356 aa19.52■□□□□ 0.72
NME1-210ENST00000512768 RBAKQ9NYW8 714 aaPredicted RBP19.52■□□□□ 0.72
NME1-210ENST00000512768 PCDH10Q9P2E7 1040 aa19.52■□□□□ 0.72
NME1-210ENST00000512768 PCDHB2Q9Y5E7 798 aa19.52■□□□□ 0.72
NME1-210ENST00000512768 CSF2RAP15509 400 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 KRT31Q15323 416 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 FAM43BQ6ZT52 329 aaPredicted RBP19.51■□□□□ 0.71
NME1-210ENST00000512768 INTS8Q75QN2 995 aaKnown RBP19.51■□□□□ 0.71
NME1-210ENST00000512768 RTN4RL1Q86UN2 441 aaPredicted RBP19.51■□□□□ 0.71
NME1-210ENST00000512768 BRSK2Q8IWQ3 736 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 SMG8Q8ND04 991 aaKnown RBP19.51■□□□□ 0.71
NME1-210ENST00000512768 LINC01599Q8WXQ3 324 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 DPF3Q92784 378 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 MFSD14AQ96MC6 490 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 ACAP3Q96P50 834 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 TRAIPQ9BWF2 469 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 APOL6Q9BWW8 343 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 RPF1Q9H9Y2 349 aaKnown RBP19.51■□□□□ 0.71
NME1-210ENST00000512768 RGS18Q9NS28 235 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 SNTG2Q9NY99 539 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 TAB2Q9NYJ8 693 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 LIMA1Q9UHB6 759 aaKnown RBP19.51■□□□□ 0.71
NME1-210ENST00000512768 HES2Q9Y543 173 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 IPPQ9Y573 584 aa19.51■□□□□ 0.71
NME1-210ENST00000512768 SKIP12755 728 aa19.5■□□□□ 0.71
NME1-210ENST00000512768 IBSPP21815 317 aaPredicted RBP19.5■□□□□ 0.71
NME1-210ENST00000512768 RAB27AP51159 221 aa19.5■□□□□ 0.71
NME1-210ENST00000512768 FANCCQ00597 558 aa19.5■□□□□ 0.71
NME1-210ENST00000512768 ENOX2Q16206 610 aaKnown RBP19.5■□□□□ 0.71
NME1-210ENST00000512768 CNKSR3Q6P9H4 555 aa19.5■□□□□ 0.71
NME1-210ENST00000512768 TRIM59Q8IWR1 403 aa19.5■□□□□ 0.71
NME1-210ENST00000512768 HACE1Q8IYU2 909 aa19.5■□□□□ 0.71
NME1-210ENST00000512768 VWCEQ96DN2 955 aa19.5■□□□□ 0.71
NME1-210ENST00000512768 TUBGCP2Q9BSJ2 902 aa19.5■□□□□ 0.71
NME1-210ENST00000512768 TSPYL2Q9H2G4 693 aaPredicted RBP19.5■□□□□ 0.71
NME1-210ENST00000512768 GRPEL1Q9HAV7 217 aa19.5■□□□□ 0.71
NME1-210ENST00000512768 CITO14578 2027 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 A0A0U1RQF3 1178 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 ENPP3O14638 875 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 SERPINC1P01008 464 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 CXCL8P10145 99 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 PRKCSHP14314 528 aaPredicted RBP19.49■□□□□ 0.71
NME1-210ENST00000512768 VAMP7P51809 220 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 COPB1P53618 953 aaKnown RBP19.49■□□□□ 0.71
NME1-210ENST00000512768 PLCB2Q00722 1185 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 BFSP1Q12934 665 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 PSMD6Q15008 389 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 DCAF17Q5H9S7 520 aaPredicted RBP19.49■□□□□ 0.71
NME1-210ENST00000512768 SLC24A5Q71RS6 500 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 MRPL10Q7Z7H8 261 aaKnown RBP19.49■□□□□ 0.71
NME1-210ENST00000512768 ECHDC2Q86YB7 292 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 RPUSD2Q8IZ73 545 aaKnown RBP19.49■□□□□ 0.71
NME1-210ENST00000512768 PLEKHO2Q8TD55 490 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 BADQ92934 168 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 CCDC127Q96BQ5 260 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 FAM212AQ96EL1 285 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 RNF39Q9H2S5 420 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 C1orf112Q9NSG2 853 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 PARP2Q9UGN5 583 aa19.49■□□□□ 0.71
NME1-210ENST00000512768 ZMYND8Q9ULU4 1186 aaPredicted RBP19.49■□□□□ 0.71
NME1-210ENST00000512768 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.49■□□□□ 0.71
NME1-210ENST00000512768 C9IYK1 514 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 ZNF623O75123 536 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 RECQL4O94761 1208 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 IL18RAPO95256 599 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 TPM2P07951 284 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 TRIM49P0CI25 452 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 TRIM49CP0CI26 452 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 ITGA4P13612 1032 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 SYN1P17600 705 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 AKAP5P24588 427 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 YARSP54577 528 aaKnown RBP19.48■□□□□ 0.71
NME1-210ENST00000512768 WNT7BP56706 349 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 POU5F1Q01860 360 aaKnown RBP19.48■□□□□ 0.71
NME1-210ENST00000512768 MAN2A1Q16706 1144 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 SLC10A6Q3KNW5 377 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 TCERG1LQ5VWI1 586 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 APTXQ7Z2E3 356 aaKnown RBP19.48■□□□□ 0.71
NME1-210ENST00000512768 RNF169Q8NCN4 708 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 TMC2Q8TDI7 906 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 PARD3BQ8TEW8 1205 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 VPS16Q9H269 839 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 PDE11AQ9HCR9 933 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 IL23AQ9NPF7 189 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 ANK1P16157 1881 aa19.48■□□□□ 0.71
NME1-210ENST00000512768 MICAL3Q7RTP6 2002 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms