RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 TMEM247A6NEH6 219 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 CREB3O43889 395 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 IFNA8P32881 189 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 ANKRD7Q92527 254 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 TRPV6Q9H1D0 765 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 MADDQ8WXG6 1647 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 CSF1RP07333 972 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 YWHABP31946 246 aaKnown RBP13.2□□□□□ -0.3
COL11A1-210ENST00000512756 FMO5P49326 533 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 AGBL2Q5U5Z8 902 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 KCNV1Q6PIU1 500 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 RGS9BPQ6ZS82 235 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 SLC35G2Q8TBE7 412 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 ABTB1Q969K4 478 aaPredicted RBP13.2□□□□□ -0.3
COL11A1-210ENST00000512756 ALKBH8Q96BT7 664 aaKnown RBP13.2□□□□□ -0.3
COL11A1-210ENST00000512756 FAM217BQ9NTX9 383 aaPredicted RBP13.2□□□□□ -0.3
COL11A1-210ENST00000512756 HPCAL4Q9UM19 191 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 AP3B1O00203 1094 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 DGAT1O75907 488 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 SPP2Q13103 211 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 CDC26Q8NHZ8 85 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 NCLNQ969V3 563 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 TRABDQ9H4I3 376 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 DHX35Q9H5Z1 703 aaKnown RBP13.2□□□□□ -0.3
COL11A1-210ENST00000512756 QRICH2Q9H0J4 1663 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 CFAP69A5D8W1 941 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 APOL1O14791 398 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 CYP2C19P33261 490 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 STILQ15468 1287 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 ZNF560Q96MR9 790 aa13.2□□□□□ -0.3
COL11A1-210ENST00000512756 ZNF185O15231 689 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 EIF3HO15372 352 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL11A1-210ENST00000512756 E2F6O75461 281 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 OCA2Q04671 838 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 SF3B3Q15393 1217 aaKnown RBP13.19□□□□□ -0.3
COL11A1-210ENST00000512756 RASSF3Q86WH2 238 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 APOBEC3FQ8IUX4 373 aaKnown RBP13.19□□□□□ -0.3
COL11A1-210ENST00000512756 SGSM3Q96HU1 749 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 OLFM3Q96PB7 478 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 ING2Q9H160 280 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 HSPBP1Q9NZL4 362 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 PIK3R2O00459 728 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 PPP1R12AO14974 1030 aaPredicted RBP13.19□□□□□ -0.3
COL11A1-210ENST00000512756 MYL3P08590 195 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 STK4Q13043 487 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 MTHFD1LQ6UB35 978 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 RAD9BQ6WBX8 426 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 CEP19Q96LK0 163 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 SLC13A1Q9BZW2 595 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 AGPAT5Q9NUQ2 364 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 INPP5FQ9Y2H2 1132 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 PITPNM2Q9BZ72 1349 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 FGFR4P22455 802 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 EIF3EP60228 445 aaKnown RBP13.19□□□□□ -0.3
COL11A1-210ENST00000512756 TMED1Q13445 227 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 SYN2Q92777 582 aaPredicted RBP13.19□□□□□ -0.3
COL11A1-210ENST00000512756 YY1AP1Q9H869 796 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 LMCD1Q9NZU5 365 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 RNF103-CHMP3A0A140T963 221 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 FAM205CA6NFA0 338 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 A8MXQ7 604 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 AP1B1Q10567 949 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 MKNK1Q9BUB5 465 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 RGL1Q9NZL6 768 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 NYAP2Q9P242 653 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 SNX5Q9Y5X3 404 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 CDC42BPAQ5VT25 1732 aa13.19□□□□□ -0.3
COL11A1-210ENST00000512756 CCDC195A0A1B0GUA6 201 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 ARHGAP10A1A4S6 786 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 RAD23BP54727 409 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 ACTR2P61160 394 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 DYNC1I2Q13409 638 aaKnown RBP13.18□□□□□ -0.3
COL11A1-210ENST00000512756 SRLQ86TD4 932 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 CCT8L2Q96SF2 557 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 MYMKA6NI61 221 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 ANTXR2P58335 489 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 SNRPFP62306 86 aaKnown RBP13.18□□□□□ -0.3
COL11A1-210ENST00000512756 POU5F1BQ06416 359 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 ACTN3Q08043 901 aaPredicted RBP13.18□□□□□ -0.3
COL11A1-210ENST00000512756 XKR3Q5GH77 459 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 KIRREL3Q8IZU9 778 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 ICA1LQ8NDH6 482 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 ZNF473Q8WTR7 871 aaKnown RBP13.18□□□□□ -0.3
COL11A1-210ENST00000512756 C18orf8Q96DM3 657 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 TCP11X1B4DZS4 312 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 SMAPO00193 183 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 RECQLP46063 649 aaPredicted RBP13.18□□□□□ -0.3
COL11A1-210ENST00000512756 NSUN2Q08J23 767 aaKnown RBP eCLIP13.18□□□□□ -0.3
COL11A1-210ENST00000512756 SCN4BQ8IWT1 228 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 CATSPER1Q8NEC5 780 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 ULK4Q96C45 1275 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 TNIP3Q96KP6 325 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 SENP7Q9BQF6 1050 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 REEP2Q9BRK0 252 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 JPH1Q9HDC5 661 aaPredicted RBP13.18□□□□□ -0.3
COL11A1-210ENST00000512756 PSD3Q9NYI0 1048 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 ADA2Q9NZK5 511 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 ZBBXA8MT70 800 aa13.18□□□□□ -0.3
COL11A1-210ENST00000512756 AARSP49588 968 aaKnown RBP eCLIP13.18□□□□□ -0.3
COL11A1-210ENST00000512756 ELMSAN1Q6PJG2 1045 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms