RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 TMEM221A6NGB7 291 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SOBPA7XYQ1 873 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SOX1O00570 391 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 FOXS1O43638 330 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PPP1R12BO60237 982 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SEMA7AO75326 666 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 WISP2O76076 250 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SETSIPP0DME0 302 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TATP17735 454 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SFPQP23246 707 aaKnown RBP eCLIP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 EPHX2P34913 555 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZNF165P49910 485 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 USP14P54578 494 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 KRT83P78385 493 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 FAM160A1Q05DH4 1040 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PPARAQ07869 468 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 HIC1Q14526 733 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ERMARDQ5T6L9 678 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 RNF187Q5TA31 235 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 MEI1Q5TIA1 1274 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 FBXL19Q6PCT2 694 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SDCCAG8Q86SQ7 713 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 FAM184AQ8NB25 1140 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 WNK4Q96J92 1243 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ECHDC1Q9NTX5 307 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 GIMAP4Q9NUV9 329 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 RBM28Q9NW13 759 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 CWC15Q9P013 229 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TRPS1Q9UHF7 1281 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZNHIT2Q9UHR6 403 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ACSL6Q9UKU0 697 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 MTF2Q9Y483 593 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 STYXL1Q9Y6J8 313 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 RYR2Q92736 4967 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 IGKV6D-21A0A0A0MT36 114 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 A0A1W2PRG0 241 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 FXYD1O00168 92 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 STXBP3O00186 592 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 WDR46O15213 610 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ERLIN1O75477 346 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 MICAL2O94851 1124 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 FBXO21O94952 628 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ADAMTS2O95450 1211 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SLC3A2P08195 630 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TCF4P15884 667 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 STMN1P16949 149 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZKSCAN1P17029 563 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TMOD1P28289 359 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SLC12A3P55017 1021 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SNX16P57768 344 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PPP3CAQ08209 521 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 UBE4AQ14139 1066 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 KIAA2026Q5HYC2 2103 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TSTD2Q5T7W7 516 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 JAKMIP3Q5VZ66 844 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 LEKR1Q6ZMV7 388 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 DET1Q7L5Y6 550 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 FUKQ8N0W3 1084 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 LILRA2Q8N149 483 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 LZTR1Q8N653 840 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 IPO4Q8TEX9 1081 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 CHAC2Q8WUX2 184 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 DNAAF4Q8WXU2 420 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SCLT1Q96NL6 688 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 COL25A1Q9BXS0 654 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZMYND12Q9H0C1 365 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 EPB41L1Q9H4G0 881 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZCCHC4Q9H5U6 513 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TCP11L1Q9NUJ3 509 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 GNEQ9Y223 722 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TIMM22Q9Y584 194 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 CNOT1A5YKK6 2376 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TDRD6O60522 2096 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ARID1BQ8NFD5 2236 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SH3BP5O60239 455 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 LILRB3O75022 631 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SNRPA1P09661 255 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 COL6A2P12110 1019 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PON1P27169 355 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 MARCKSL1P49006 195 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TIMM10P62072 90 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PHEXP78562 749 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 EFNB1P98172 346 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 DEFB115Q30KQ5 88 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 GTDC1Q4AE62 458 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SBK1Q52WX2 424 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 HSP90AB3PQ58FF7 597 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SPDYAQ5MJ70 313 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 C6orf163Q5TEZ5 329 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 NUTM2GQ5VZR2 741 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ATL3Q6DD88 541 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 RSBN1LQ6PCB5 846 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 CKAP2LQ8IYA6 745 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 FITM2Q8N6M3 262 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SCG3Q8WXD2 468 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 HERVK_113Q902F9 699 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZNF689Q96CS4 500 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 OXNAD1Q96HP4 312 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 RNF170Q96K19 258 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 GPR78Q96P69 363 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms