RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 DNASE1L2Q92874 299 aa12.93□□□□□ -0.34
RNF4-216ENST00000511859 CCDC51Q96ER9 411 aa12.93□□□□□ -0.34
RNF4-216ENST00000511859 CCDC136Q96JN2 1154 aa12.93□□□□□ -0.34
RNF4-216ENST00000511859 MINDY3Q9H8M7 445 aa12.93□□□□□ -0.34
RNF4-216ENST00000511859 GDE1Q9NZC3 331 aa12.93□□□□□ -0.34
RNF4-216ENST00000511859 PPME1Q9Y570 386 aa12.93□□□□□ -0.34
RNF4-216ENST00000511859 TMEM150BA6NC51 233 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 F8W810 466 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 SLC27A2O14975 620 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 PSMD10O75832 226 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 ERLIN2O94905 339 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 MLH1P40692 756 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 LIMK1P53667 647 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 ACAP1Q15027 740 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 NOTUMQ6P988 496 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 ANO5Q75V66 913 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 NPAS3Q8IXF0 933 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 HACE1Q8IYU2 909 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 ZNF687Q8N1G0 1237 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 PSPC1Q8WXF1 523 aaKnown RBP12.92□□□□□ -0.34
RNF4-216ENST00000511859 SLC7A3Q8WY07 619 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 ZFP42Q96MM3 310 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 CLSTN3Q9BQT9 956 aa12.92□□□□□ -0.34
RNF4-216ENST00000511859 SF3B1O75533 1304 aaKnown RBP eCLIP12.91□□□□□ -0.341e-6■■■■■ 109.1
RNF4-216ENST00000511859 GREB1Q4ZG55 1949 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 SHISA7A6NL88 538 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 ADAMTS3O15072 1205 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 CCL16O15467 120 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 GDF9O60383 454 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 PROS1P07225 676 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 CXCL12P48061 93 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 RCAN1P53805 252 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 PSMC5P62195 406 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 LAMTOR4Q0VGL1 99 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 PABPC1LQ4VXU2 614 aaKnown RBP12.91□□□□□ -0.34
RNF4-216ENST00000511859 RTP2Q5QGT7 225 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 PDXDC1Q6P996 788 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 PRSS55Q6UWB4 352 aaPredicted RBP12.91□□□□□ -0.34
RNF4-216ENST00000511859 B3GNT9Q6UX72 402 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 LNX1Q8TBB1 728 aaPredicted RBP12.91□□□□□ -0.34
RNF4-216ENST00000511859 PIK3R5Q8WYR1 880 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 ELSPBP1Q96BH3 223 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 TTPALQ9BTX7 342 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 EIF2AQ9BY44 585 aaKnown RBP12.91□□□□□ -0.34
RNF4-216ENST00000511859 LMAN1LQ9HAT1 526 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 BRPF3Q9ULD4 1205 aa12.91□□□□□ -0.34
RNF4-216ENST00000511859 CCDC196A0A1B0GTZ2 297 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 GOLGA8AA7E2F4 631 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 GOLGA8BA8MQT2 603 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 EDIL3O43854 480 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 DKC1O60832 514 aaKnown RBP eCLIP12.9□□□□□ -0.34
RNF4-216ENST00000511859 KCNA4P22459 653 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 CDC27P30260 824 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 NECTIN1Q15223 517 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 Q4G0T1 1027 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 CREB3L3Q68CJ9 461 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.9□□□□□ -0.34
RNF4-216ENST00000511859 GSTCDQ8NEC7 633 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 TCP11Q8WWU5 503 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 PLA2G2FQ9BZM2 168 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 TRIM6Q9C030 488 aaPredicted RBP12.9□□□□□ -0.34
RNF4-216ENST00000511859 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 DHX33Q9H6R0 707 aaKnown RBP12.9□□□□□ -0.34
RNF4-216ENST00000511859 DNMT3BQ9UBC3 853 aaKnown RBP12.9□□□□□ -0.34
RNF4-216ENST00000511859 NDRG2Q9UN36 371 aaKnown RBP12.9□□□□□ -0.34
RNF4-216ENST00000511859 MRPS23Q9Y3D9 190 aaKnown RBP12.9□□□□□ -0.34
RNF4-216ENST00000511859 HES2Q9Y543 173 aa12.9□□□□□ -0.34
RNF4-216ENST00000511859 SPEGQ15772 3267 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 LAMA1P25391 3075 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 TM4SF5O14894 197 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 HRO43593 1189 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 RFC5P40937 340 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 EXOSC10Q01780 885 aaKnown RBP12.89□□□□□ -0.35
RNF4-216ENST00000511859 GRIK3Q13003 919 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 HSP90AA2PQ14568 343 aaPredicted RBP12.89□□□□□ -0.35
RNF4-216ENST00000511859 PSMD5Q16401 504 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 AXDND1Q5T1B0 1012 aaPredicted RBP12.89□□□□□ -0.35
RNF4-216ENST00000511859 TANGO2Q6ICL3 276 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 RNF149Q8NC42 400 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 SLC7A14Q8TBB6 771 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 IRF7Q92985 503 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 GJA10Q969M2 543 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 TMEM143Q96AN5 459 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 MCRS1Q96EZ8 462 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 LSG1Q9H089 658 aaKnown RBP12.89□□□□□ -0.35
RNF4-216ENST00000511859 TRPV5Q9NQA5 729 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 AVENQ9NQS1 362 aaPredicted RBP12.89□□□□□ -0.35
RNF4-216ENST00000511859 ZMYM2Q9UBW7 1377 aa12.89□□□□□ -0.35
RNF4-216ENST00000511859 PRPF3O43395 683 aaKnown RBP12.88□□□□□ -0.35
RNF4-216ENST00000511859 TSPAN1O60635 241 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 ADD1P35611 737 aaKnown RBP12.88□□□□□ -0.35
RNF4-216ENST00000511859 QARSP47897 775 aaKnown RBP12.88□□□□□ -0.35
RNF4-216ENST00000511859 NPEPPSP55786 919 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 POU5F1BQ06416 359 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 ELAVL2Q12926 359 aaKnown RBP12.88□□□□□ -0.35
RNF4-216ENST00000511859 RAB33AQ14088 237 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 FAM171A1Q5VUB5 890 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 PLA2G4FQ68DD2 849 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 DHX32Q7L7V1 743 aaKnown RBP12.88□□□□□ -0.35
RNF4-216ENST00000511859 FERMT3Q86UX7 667 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms