RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 ADSLP30566 484 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 IL6STP40189 918 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 ARFIP2P53365 341 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 GP2P55259 537 aaKnown RBP6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 POU5F1BQ06416 359 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 SNAPC2Q13487 334 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 MTM1Q13496 603 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 CCDC157Q569K6 752 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 EMC10Q5UCC4 262 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 ZNF605Q86T29 641 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 FAM90A1Q86YD7 464 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 REXO1L1PQ8IX06 675 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 ANKRD42Q8N9B4 389 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 OR10H5Q8NGA6 315 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 ZCCHC14Q8WYQ9 949 aaKnown RBP6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 MRGPRX1Q96LB2 322 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 ZSWIM3Q96MP5 696 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 KATNBL1Q9H079 304 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 LANCL2Q9NS86 450 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 GPRC5BQ9NZH0 403 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 ABCF2Q9UG63 623 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 FEZ2Q9UHY8 353 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 CTDP1Q9Y5B0 961 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 PCDHA3Q9Y5H8 950 aa6.68□□□□□ -1.34
HMGB1P47-201ENST00000511281 DAPK3O43293 454 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 ADCY6O43306 1168 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 HYAL3O43820 417 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 FGF18O76093 207 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 ITGB5P18084 799 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 PPM1AP35813 382 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 MLLT6P55198 1093 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 CTXN1P60606 82 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 FOXO4P98177 505 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 SMAD4Q13485 552 aaKnown RBP6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 CNGA2Q16280 664 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 PRR16Q569H4 304 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 DACT2Q5SW24 774 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 PQLC1Q8N2U9 271 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 ZGPATQ8N5A5 531 aaKnown RBP6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 KBTBD7Q8WVZ9 684 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 TMX3Q96JJ7 454 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 NOX5Q96PH1 765 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 UIMC1Q96RL1 719 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 VRK1Q99986 396 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 CRB3Q9BUF7 120 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 DPH1Q9BZG8 443 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 C14orf93Q9H972 538 aaKnown RBP6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 ARMT1Q9H993 441 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 CASS4Q9NQ75 786 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 GNL3LQ9NVN8 582 aaKnown RBP6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 SIDT1Q9NXL6 827 aaKnown RBP6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 GPRC5DQ9NZD1 345 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 LUZP4Q9P127 313 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 LRCH1Q9Y2L9 728 aa6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 MYBBP1AQ9BQG0 1328 aaKnown RBP6.67□□□□□ -1.34
HMGB1P47-201ENST00000511281 ZNF503-AS2A6NEH8 195 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 KPNA5O15131 536 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 ALDH1A2O94788 518 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 IL18RAPO95256 599 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 NPR1P16066 1061 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 SYN1P17600 705 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 PRDX5P30044 214 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 STAT5BP51692 787 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 FMO1Q01740 532 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 TNFAIP2Q03169 654 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 DAG1Q14118 895 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 FAM209BQ5JX69 171 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 RSPH3Q86UC2 560 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 TRMT2AQ8IZ69 625 aaKnown RBP6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 PLA2G15Q8NCC3 412 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 ZSCAN18Q8TBC5 510 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 MCOLN1Q9GZU1 580 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 CERS4Q9HA82 394 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 TLR9Q9NR96 1032 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 CROTQ9UKG9 612 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 CORO2BQ9UQ03 480 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 USP19O94966 1318 aa6.66□□□□□ -1.34
HMGB1P47-201ENST00000511281 NBNO60934 754 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 GPR32O75388 356 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 HMGCRP04035 888 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 GYPEP15421 78 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 DDCP20711 480 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 KIR2DL3P43628 341 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 STT3AP46977 705 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 NCKAP1LP55160 1127 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 CAP1Q01518 475 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 SP140Q13342 867 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 RALBP1Q15311 655 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 TUBB8Q3ZCM7 444 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 GADL1Q6ZQY3 521 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 SYDE1Q6ZW31 735 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 STK32CQ86UX6 486 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 SMAP1Q8IYB5 467 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 BRIX1Q8TDN6 353 aaKnown RBP6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 KIAA1191Q96A73 305 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 NMD3Q96D46 503 aaKnown RBP6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 AJUBAQ96IF1 538 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 TRIM54Q9BYV2 358 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 VPS11Q9H270 941 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 MRPL46Q9H2W6 279 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms