RNA–Protein interactions for RNA: ENST00000509593.1

ABCE1-208, Transcript of ATP binding cassette subfamily E member 1, human

TSL 5

Gene ABCE1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCE1-208	ENST00000509593	EIF2B4	Q9UI10	523 aa	Known RBP	4.28	□□□□□ -1.72
ABCE1-208	ENST00000509593	EDAR	Q9UNE0	448 aa		4.28	□□□□□ -1.72
ABCE1-208	ENST00000509593	COL4A3	Q01955	1670 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	CCDC88B	A6NC98	1476 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	AHRR	A9YTQ3	701 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593		K7ESF4	209 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	RECQL4	O94761	1208 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	SEC24D	O94855	1032 aa	Predicted RBP	4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	ABHD16A	O95870	558 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	MT-CO1	P00395	513 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	ITGB1	P05556	798 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	CLEC2L	P0C7M8	214 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	CPE	P16870	476 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	RAB27A	P51159	221 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	FAM189B	P81408	668 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	DUSP2	Q05923	314 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	MGAT5	Q09328	741 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	UBE3C	Q15386	1083 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	VPS72	Q15906	364 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	LY6G5C	Q5SRR4	150 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	ODR4	Q5SWX8	454 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	RASSF3	Q86WH2	238 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	LYSMD2	Q8IV50	215 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	ZNF610	Q8N9Z0	462 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	OR52N2	Q8NGI0	321 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	JDP2	Q8WYK2	163 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	IL17RA	Q96F46	866 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	FAM193B	Q96PV7	902 aa	Predicted RBP	4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	ANO3	Q9BYT9	981 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	KCNH6	Q9H252	994 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	TMPRSS11E	Q9UL52	423 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593	EID1	Q9Y6B2	187 aa		4.27	□□□□□ -1.73
ABCE1-208	ENST00000509593		A0A1W2PR48	441 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	SHTN1	A0MZ66	631 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	TRIM24	O15164	1050 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	PRPF3	O43395	683 aa	Known RBP	4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	PPFIA2	O75334	1257 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	S100B	P04271	92 aa	Predicted RBP	4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	XPA	P23025	273 aa	Predicted RBP	4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	APOBEC3A	P31941	199 aa	Predicted RBP	4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	LSP1	P33241	339 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	GZMK	P49863	264 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	SESN3	P58005	492 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	PTPA	Q15257	358 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	TIGD2	Q4W5G0	525 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	CT83	Q5H943	113 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	GPR158	Q5T848	1215 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	KCNV1	Q6PIU1	500 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	LMBR1L	Q6UX01	489 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	HOOK2	Q96ED9	719 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	AHCYL2	Q96HN2	611 aa	Known RBP	4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	PDCD2L	Q9BRP1	358 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	NDC1	Q9BTX1	674 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	CHPF2	Q9P2E5	772 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	HDAC5	Q9UQL6	1122 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	HS3ST4	Q9Y661	456 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	NUMBL	Q9Y6R0	609 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	PRDM2	Q13029	1718 aa		4.26	□□□□□ -1.73
ABCE1-208	ENST00000509593	IFT140	Q96RY7	1462 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	GOLGA8A	A7E2F4	631 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	LEFTY2	O00292	366 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	AKAP10	O43572	662 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	LPXN	O60711	386 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	ULK1	O75385	1050 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	MYBL2	P10244	700 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	GYPE	P15421	78 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	GPR15	P49685	360 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	NEK2	P51955	445 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	PPARA	Q07869	468 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	KLF1	Q13351	362 aa	Predicted RBP	4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	TRIM25	Q14258	630 aa	Known RBP	4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	CSRP2	Q16527	193 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	NFE2	Q16621	373 aa	Predicted RBP	4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	PTPN21	Q16825	1174 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	METTL24	Q5JXM2	366 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	LRRC55	Q6ZSA7	311 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	FRMD7	Q6ZUT3	714 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	C11orf74	Q86VG3	221 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	FMNL3	Q8IVF7	1028 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	EAF2	Q96CJ1	260 aa	Predicted RBP	4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	FAXDC2	Q96IV6	333 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	SLC2A13	Q96QE2	648 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	EVL	Q9UI08	416 aa	Predicted RBP	4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	PRSS50	Q9UI38	385 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	NOC2L	Q9Y3T9	749 aa	Known RBP	4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	PPP2R3B	Q9Y5P8	575 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	URB2	Q14146	1524 aa	Known RBP	4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	ZMYM3	Q14202	1370 aa		4.25	□□□□□ -1.73
ABCE1-208	ENST00000509593	CENPVL1	A0A0U1RR11	272 aa		4.24	□□□□□ -1.73
ABCE1-208	ENST00000509593	GRID2IP	A4D2P6	1211 aa		4.24	□□□□□ -1.73
ABCE1-208	ENST00000509593	KDM1A	O60341	852 aa		4.24	□□□□□ -1.73
ABCE1-208	ENST00000509593	NRP2	O60462	931 aa		4.24	□□□□□ -1.73
ABCE1-208	ENST00000509593	LPL	P06858	475 aa		4.24	□□□□□ -1.73
ABCE1-208	ENST00000509593	HMGB1	P09429	215 aa	Known RBP	4.24	□□□□□ -1.73
ABCE1-208	ENST00000509593	LAG3	P18627	525 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms