RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 ST18O60284 1047 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 PRKCBP05771 671 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 TOB1P50616 345 aaPredicted RBP13.93□□□□□ -0.18
KDM3B-206ENST00000509468 RABEP1Q15276 862 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 KRT79Q5XKE5 535 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 FUT10Q6P4F1 479 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 DTHD1Q6ZMT9 781 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 IGSF22Q8N9C0 903 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 BSNDQ8WZ55 320 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 STAMQ92783 540 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 GPR62Q9BZJ7 368 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 CCDC113Q9H0I3 377 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 PDZD7Q9H5P4 517 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 SNTG2Q9NY99 539 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 PLXNA3P51805 1871 aa13.93□□□□□ -0.18
KDM3B-206ENST00000509468 SF3B1O75533 1304 aaKnown RBP eCLIP13.92□□□□□ -0.18
KDM3B-206ENST00000509468 PHLPP2Q6ZVD8 1323 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 ZNF318Q5VUA4 2279 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 BRD1O95696 1058 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 LIG1P18858 919 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 PRPHP41219 470 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 ECM1Q16610 540 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 DCAF4L1Q3SXM0 396 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 C8orf34Q49A92 452 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 IER5LQ5T953 404 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 PDXDC1Q6P996 788 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 PALB2Q86YC2 1186 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 KCTD17Q8N5Z5 321 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 RIN2Q8WYP3 895 aaPredicted RBP13.92□□□□□ -0.18
KDM3B-206ENST00000509468 PIDD1Q9HB75 910 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 DDX19AQ9NUU7 478 aaKnown RBP13.92□□□□□ -0.18
KDM3B-206ENST00000509468 PCDHB6Q9Y5E3 794 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 DENND4AQ7Z401 1863 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 C2orf16Q68DN1 1984 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 MUC6Q6W4X9 2439 aa13.92□□□□□ -0.18
KDM3B-206ENST00000509468 TTLL13PA6NNM8 815 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 CCDC169A6NNP5 214 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 F8W810 466 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 RECQL4O94761 1208 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 PAPLNO95428 1278 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 ASGR2P07307 311 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 SPATA31D3P0C874 917 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 MRE11P49959 708 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 ELAVL2Q12926 359 aaKnown RBP13.91□□□□□ -0.18
KDM3B-206ENST00000509468 TDGQ13569 410 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 NBR1Q14596 966 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 RILPL1Q5EBL4 403 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 ATF7IP2Q5U623 682 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 FAM171A1Q5VUB5 890 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 MCTP1Q6DN14 999 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 LILRA6Q6PI73 481 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 SPATA31D4Q6ZUB0 917 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 SNX29Q8TEQ0 813 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 NT5C3AQ9H0P0 336 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 TMEM134Q9H6X4 195 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 C17orf75Q9HAS0 396 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 POLD4Q9HCU8 107 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 WDR6Q9NNW5 1121 aaKnown RBP13.91□□□□□ -0.18
KDM3B-206ENST00000509468 ZDHHC7Q9NXF8 308 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 IGSF9Q9P2J2 1179 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 RBM19Q9Y4C8 960 aaKnown RBP13.91□□□□□ -0.18
KDM3B-206ENST00000509468 KMT2EQ8IZD2 1858 aa13.91□□□□□ -0.18
KDM3B-206ENST00000509468 TGM5O43548 720 aa13.9□□□□□ -0.18
KDM3B-206ENST00000509468 NT5DC1Q5TFE4 455 aa13.9□□□□□ -0.18
KDM3B-206ENST00000509468 DCLRE1AQ6PJP8 1040 aa13.9□□□□□ -0.18
KDM3B-206ENST00000509468 PRSS33Q8NF86 280 aa13.9□□□□□ -0.18
KDM3B-206ENST00000509468 SMG7Q92540 1137 aaKnown RBP13.9□□□□□ -0.18
KDM3B-206ENST00000509468 RABGGTAQ92696 567 aa13.9□□□□□ -0.18
KDM3B-206ENST00000509468 NXPE3Q969Y0 559 aa13.9□□□□□ -0.18
KDM3B-206ENST00000509468 B3GALT6Q96L58 329 aa13.9□□□□□ -0.18
KDM3B-206ENST00000509468 DRC1Q96MC2 740 aa13.9□□□□□ -0.18
KDM3B-206ENST00000509468 TTPALQ9BTX7 342 aa13.9□□□□□ -0.18
KDM3B-206ENST00000509468 TIPINQ9BVW5 301 aa13.9□□□□□ -0.18
KDM3B-206ENST00000509468 UPF2Q9HAU5 1272 aaKnown RBP13.9□□□□□ -0.18
KDM3B-206ENST00000509468 KCNK12Q9HB15 430 aa13.9□□□□□ -0.18
KDM3B-206ENST00000509468 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.9□□□□□ -0.18
KDM3B-206ENST00000509468 TNFSF13BQ9Y275 285 aa13.9□□□□□ -0.18
KDM3B-206ENST00000509468 GDAQ9Y2T3 454 aa13.9□□□□□ -0.18
KDM3B-206ENST00000509468 CASTOR2A6NHX0 329 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 E9PMD0 336 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 H3BQV1 296 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 PTGESO14684 152 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 RFPL2O75678 378 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 GBP2P32456 591 aaPredicted RBP13.89□□□□□ -0.19
KDM3B-206ENST00000509468 NPTX2P47972 431 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 MCM2P49736 904 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 CLCN5P51795 746 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 YARSP54577 528 aaKnown RBP13.89□□□□□ -0.19
KDM3B-206ENST00000509468 VCPP55072 806 aaKnown RBP13.89□□□□□ -0.19
KDM3B-206ENST00000509468 PEX3P56589 373 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 DMP1Q13316 513 aaPredicted RBP13.89□□□□□ -0.19
KDM3B-206ENST00000509468 IL17AQ16552 155 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 EEF1DP3Q658K8 133 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 CEP57Q86XR8 500 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 PIK3R5Q8WYR1 880 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 UROC1Q96N76 676 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 PAAF1Q9BRP4 392 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 NTPCRQ9BSD7 190 aaKnown RBP13.89□□□□□ -0.19
KDM3B-206ENST00000509468 MRPL4Q9BYD3 311 aaKnown RBP13.89□□□□□ -0.19
KDM3B-206ENST00000509468 PRKD2Q9BZL6 878 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms