RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 CKAP2LQ8IYA6 745 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 KIAA0319LQ8IZA0 1049 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 CSGALNACT1Q8TDX6 532 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 GAB3Q8WWW8 586 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 FGF13Q92913 245 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 IRF7Q92985 503 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 ZNF707Q96C28 371 aaPredicted RBP4.38□□□□□ -1.71
RNF4-211ENST00000509206 MCRS1Q96EZ8 462 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 INPP4AQ96PE3 977 aaPredicted RBP4.38□□□□□ -1.71
RNF4-211ENST00000509206 RPS6KC1Q96S38 1066 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 MAP7D2Q96T17 732 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 ZKSCAN3Q9BRR0 538 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 TRMT61BQ9BVS5 477 aaKnown RBP4.38□□□□□ -1.71
RNF4-211ENST00000509206 NRDE2Q9H7Z3 1164 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 JMJD4Q9H9V9 463 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 ECHDC1Q9NTX5 307 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 RNF19AQ9NV58 838 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 KANSL3Q9P2N6 904 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 WASF3Q9UPY6 502 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 TNNQ9UQP3 1299 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 AKT3Q9Y243 479 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 RBM19Q9Y4C8 960 aaKnown RBP4.38□□□□□ -1.71
RNF4-211ENST00000509206 TELO2Q9Y4R8 837 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 PCDHB11Q9Y5F2 797 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 SPEGQ15772 3267 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 KIAA1217Q5T5P2 1943 aa4.38□□□□□ -1.71
RNF4-211ENST00000509206 ADAMTS20P59510 1910 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 CCL16O15467 120 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 TGM5O43548 720 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 HBP1O60381 514 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 ATP9AO75110 1047 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 ECI2O75521 394 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 VTNP04004 478 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 SOD2P04179 222 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 NTRK1P04629 796 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 CCNE1P24864 410 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 VARSP26640 1264 aaKnown RBP4.37□□□□□ -1.71
RNF4-211ENST00000509206 OR1G1P47890 313 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 SLC11A1P49279 550 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 KPNA1P52294 538 aaPredicted RBP4.37□□□□□ -1.71
RNF4-211ENST00000509206 ATXN3P54252 364 aaPredicted RBP4.37□□□□□ -1.71
RNF4-211ENST00000509206 SEC13P55735 322 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 NLRP11P59045 1033 aaKnown RBP4.37□□□□□ -1.71
RNF4-211ENST00000509206 NTHL1P78549 312 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 USP4Q13107 963 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 FZD5Q13467 585 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 MTMR1Q13613 665 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 DSC3Q14574 896 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 ZNF484Q5JVG2 852 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 PCNX4Q63HM2 1172 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 TWF2Q6IBS0 349 aaKnown RBP4.37□□□□□ -1.71
RNF4-211ENST00000509206 TCEAL6Q6IPX3 200 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 TRMT1LQ7Z2T5 733 aaKnown RBP4.37□□□□□ -1.71
RNF4-211ENST00000509206 KBTBD6Q86V97 674 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 DGKHQ86XP1 1220 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 YAF2Q8IY57 180 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 TMEFF1Q8IYR6 380 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 CHCHD4Q8N4Q1 142 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 TMEM40Q8WWA1 233 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 ESR2Q92731 530 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 DNASE1L2Q92874 299 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 LPPQ93052 612 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 TCEAL3Q969E4 200 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 GPRASP2Q96D09 838 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 PGBD4Q96DM1 585 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 KCTD15Q96SI1 283 aaPredicted RBP4.37□□□□□ -1.71
RNF4-211ENST00000509206 SEC62Q99442 399 aaKnown RBP4.37□□□□□ -1.71
RNF4-211ENST00000509206 SDF4Q9BRK5 362 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 TMEM175Q9BSA9 504 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 APOL6Q9BWW8 343 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 LRRCC1Q9C099 1032 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 RNF41Q9H4P4 317 aaPredicted RBP4.37□□□□□ -1.71
RNF4-211ENST00000509206 CLMPQ9H6B4 373 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 JPH1Q9HDC5 661 aaPredicted RBP4.37□□□□□ -1.71
RNF4-211ENST00000509206 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNF4-211ENST00000509206 TBC1D13Q9NVG8 400 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 CACNA2D2Q9NY47 1150 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 SLC9A2Q9UBY0 812 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 SLC8A2Q9UPR5 921 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 KIAA1024Q9UPX6 916 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 PRG3Q9Y2Y8 225 aaPredicted RBP4.37□□□□□ -1.71
RNF4-211ENST00000509206 MRPS23Q9Y3D9 190 aaKnown RBP4.37□□□□□ -1.71
RNF4-211ENST00000509206 PIAS3Q9Y6X2 628 aa4.37□□□□□ -1.71
RNF4-211ENST00000509206 FNDC1Q4ZHG4 1894 aaPredicted RBP4.37□□□□□ -1.71
RNF4-211ENST00000509206 SPAARA0A1B0GVQ0 90 aa4.36□□□□□ -1.71
RNF4-211ENST00000509206 KLRF2D3W0D1 207 aa4.36□□□□□ -1.71
RNF4-211ENST00000509206 NRP1O14786 923 aa4.36□□□□□ -1.71
RNF4-211ENST00000509206 ZNF263O14978 683 aa4.36□□□□□ -1.71
RNF4-211ENST00000509206 MAFGO15525 162 aa4.36□□□□□ -1.71
RNF4-211ENST00000509206 ATG13O75143 517 aa4.36□□□□□ -1.71
RNF4-211ENST00000509206 DKK1O94907 266 aa4.36□□□□□ -1.71
RNF4-211ENST00000509206 C1RP00736 705 aa4.36□□□□□ -1.71
RNF4-211ENST00000509206 HNRNPA1P09651 372 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNF4-211ENST00000509206 EIF4BP23588 611 aaKnown RBP4.36□□□□□ -1.71
RNF4-211ENST00000509206 GDI1P31150 447 aa4.36□□□□□ -1.71
RNF4-211ENST00000509206 GBP1P32455 592 aa4.36□□□□□ -1.71
RNF4-211ENST00000509206 PHKA2P46019 1235 aa4.36□□□□□ -1.71
RNF4-211ENST00000509206 RAP1GAPP47736 663 aa4.36□□□□□ -1.71
RNF4-211ENST00000509206 PXNP49023 591 aaPredicted RBP4.36□□□□□ -1.71
RNF4-211ENST00000509206 SLC26A2P50443 739 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms